Conservation of cofitness between Psest_1163 and Psest_1260 in Pseudomonas stutzeri RCH2

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas stutzeri RCH2 1.0 Psest_1163 diguanylate cyclase (GGDEF) domain 1.0 Psest_1260 type IV pilus biogenesis/stability protein PilW 0.51 11
Pseudomonas fluorescens FW300-N2C3 0.71 AO356_05010 diguanylate cyclase 0.67 AO356_06600 pilus assembly protein PilW low > 104
Pseudomonas fluorescens FW300-N2E2 0.71 Pf6N2E2_2852 GGDEF domain/EAL domain protein 0.67 Pf6N2E2_3180 Type IV pilus biogenesis protein PilF low > 103
Pseudomonas sp. RS175 0.71 PFR28_00605 hypothetical protein 0.61 PFR28_00295 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.71 PFLU_RS23815 GGDEF and EAL domain-containing protein 0.54 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW low > 109
Pseudomonas fluorescens SBW25 0.71 PFLU_RS23815 GGDEF and EAL domain-containing protein 0.54 PFLU_RS24810 type IV pilus biogenesis/stability protein PilW low > 109
Pseudomonas putida KT2440 0.71 PP_0914 GGDEF domain protein 0.53 PP_0851 Type IV pili biogenesis protein PilF low > 96
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_1777 GGDEF domain/EAL domain protein 0.64 PfGW456L13_4864 Type IV pilus biogenesis protein PilF low > 87
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_03970 diguanylate cyclase 0.63 AO353_15880 pilus assembly protein PilW low > 101
Pseudomonas simiae WCS417 0.70 PS417_22190 diguanylate cyclase 0.59 PS417_23155 pilus assembly protein PilW low > 88
Pseudomonas sp. S08-1 0.70 OH686_07220 c-di-GMP phosphodiesterase 0.64 OH686_17520 type IV pilus biogenesis/stability protein PilW low > 80
Pseudomonas fluorescens FW300-N1B4 0.70 Pf1N1B4_714 GGDEF domain/EAL domain protein 0.67 Pf1N1B4_856 Type IV pilus biogenesis protein PilF low > 87
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.65 Psyr_1246 TPR repeat protein:TPR repeat protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_4060 diguanylate cyclase/phosphodiesterase 0.65 Psyr_1246 TPR repeat protein:TPR repeat protein low > 86
Marinobacter adhaerens HP15 0.43 HP15_2352 sensory box sensor/GGDEF/EAL domain protein 0.28 HP15_1491 type IV pilus biogenesis protein PilF — —
Shewanella amazonensis SB2B 0.29 Sama_0965 GGDEF domain-containing protein (RefSeq) 0.26 Sama_2367 fimbrial biogenesis and twitching motility protein, putative (RefSeq) low > 62
Shewanella oneidensis MR-1 0.28 SO1208 GGDEF domain protein (NCBI ptt file) 0.23 SO3314 fimbrial biogenesis and twitching motility protein, putative (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.27 Shew_2823 diguanylate cyclase/phosphodiesterase (RefSeq) 0.26 Shew_1288 type IV pilus biogenesis/stability protein PilW (RefSeq) low > 60
Shewanella sp. ANA-3 0.27 Shewana3_1034 diguanylate cyclase/phosphodiesterase (RefSeq) 0.24 Shewana3_1227 type IV pilus biogenesis/stability protein PilW (RefSeq) — —
Serratia liquefaciens MT49 0.20 IAI46_00545 biofilm formation regulator HmsP 0.22 IAI46_19285 type IV pilus biogenesis/stability protein PilW low > 86
Erwinia tracheiphila SCR3 0.18 LU632_RS00325 hmsP biofilm formation regulator HmsP 0.14 LU632_RS17810 pilW type IV pilus biogenesis/stability protein PilW low > 74

Not shown: 2 genomes with orthologs for Psest_1163 only; 22 genomes with orthologs for Psest_1260 only