Conservation of cofitness between PS417_12135 and PS417_05820 in Pseudomonas simiae WCS417

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_12135 peptidylprolyl isomerase 1.0 PS417_05820 recombinase RecX 0.23 12
Pseudomonas fluorescens SBW25-INTG 1.00 PFLU_RS12825 peptidyl-prolyl cis-trans isomerase 0.99 PFLU_RS05890 recombination regulator RecX low > 109
Pseudomonas fluorescens SBW25 1.00 PFLU_RS12825 peptidyl-prolyl cis-trans isomerase 0.99 PFLU_RS05890 recombination regulator RecX — —
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_2870 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.79 PfGW456L13_4667 Regulatory protein RecX low > 87
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_5637 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.82 Pf1N1B4_3144 Regulatory protein RecX — —
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_21750 peptidylprolyl isomerase 0.89 AO353_16810 recombinase RecX low > 101
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_00440 peptidylprolyl isomerase 0.87 AO356_05665 recombinase RecX — —
Pseudomonas sp. RS175 0.97 PFR28_01391 Peptidyl-prolyl cis-trans isomerase C 0.85 PFR28_00473 Regulatory protein RecX low > 88
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2045 Peptidyl-prolyl cis-trans isomerase PpiC (EC 5.2.1.8) 0.79 Pf6N2E2_2992 Regulatory protein RecX low > 103
Pseudomonas syringae pv. syringae B728a ΔmexB 0.94 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase 0.81 Psyr_1379 Regulatory protein RecX — —
Pseudomonas syringae pv. syringae B728a 0.94 Psyr_2907 PpiC-type peptidyl-prolyl cis-trans isomerase 0.81 Psyr_1379 Regulatory protein RecX low > 86
Pseudomonas putida KT2440 0.92 PP_3070 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.74 PP_1630 Regulatory protein RecX — —
Pseudomonas stutzeri RCH2 0.84 Psest_2122 Parvulin-like peptidyl-prolyl isomerase 0.71 Psest_2871 Uncharacterized protein conserved in bacteria — —
Pseudomonas sp. S08-1 0.82 OH686_00765 Peptidyl-prolyl cis-trans isomerase PpiC 0.69 OH686_18210 Regulatory protein RecX low > 80
Shewanella amazonensis SB2B 0.68 Sama_1666 cell wall hydrolase/autolysin (RefSeq) 0.29 Sama_1047 hypothetical protein (RefSeq) — —
Alteromonas macleodii MIT1002 0.62 MIT1002_03923 Peptidyl-prolyl cis-trans isomerase C 0.22 MIT1002_01127 Regulatory protein RecX low > 70
Acinetobacter radioresistens SK82 0.55 MPMX26_02487 Peptidyl-prolyl cis-trans isomerase C 0.23 MPMX26_01307 Regulatory protein RecX low > 36
Pantoea sp. MT58 0.55 IAI47_18550 peptidylprolyl isomerase 0.32 IAI47_04305 regulatory protein RecX low > 76
Escherichia coli ECRC62 0.54 BNILDI_04770 ppiC peptidylprolyl isomerase PpiC 0.31 BNILDI_11110 recX recombination regulator RecX — —
Escherichia coli ECRC102 0.54 NIAGMN_12375 ppiC peptidylprolyl isomerase PpiC 0.31 NIAGMN_18480 recX recombination regulator RecX — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.54 OHPLBJKB_04278 Peptidyl-prolyl cis-trans isomerase C 0.31 OHPLBJKB_01036 Regulatory protein RecX low > 73
Escherichia coli Nissle 1917 0.54 ECOLIN_RS21685 peptidylprolyl isomerase PpiC 0.31 ECOLIN_RS15055 recombination regulator RecX — —
Escherichia coli ECRC101 0.54 OKFHMN_14620 ppiC peptidylprolyl isomerase PpiC 0.31 OKFHMN_20710 recX recombination regulator RecX — —
Escherichia coli ECRC99 0.54 KEDOAH_13530 ppiC peptidylprolyl isomerase PpiC 0.31 KEDOAH_07425 recX recombination regulator RecX — —
Escherichia coli ECRC101 0.54 MCAODC_05125 ppiC peptidylprolyl isomerase PpiC 0.31 MCAODC_11235 recX recombination regulator RecX — —
Escherichia coli BW25113 0.54 b3775 ppiC peptidyl-prolyl cis-trans isomerase C (rotamase C) (NCBI) 0.31 b2698 recX RecA regulator RecX (NCBI) low > 76
Escherichia coli BL21 0.54 ECD_03653 peptidyl-prolyl cis-trans isomerase C (rotamase C) 0.31 ECD_02548 regulatory protein for RecA low > 60
Escherichia coli ECOR27 0.54 NOLOHH_06755 ppiC peptidylprolyl isomerase PpiC 0.31 NOLOHH_12550 recX recombination regulator RecX — —
Escherichia coli ECRC98 0.54 JDDGAC_18240 ppiC peptidylprolyl isomerase PpiC 0.31 JDDGAC_24375 recX recombination regulator RecX — —
Escherichia fergusonii Becca 0.54 EFB2_04861 Peptidyl-prolyl cis-trans isomerase C 0.31 EFB2_01226 Regulatory protein RecX low > 86
Serratia liquefaciens MT49 0.54 IAI46_00560 peptidylprolyl isomerase 0.29 IAI46_03845 recombination regulator RecX low > 86
Enterobacter asburiae PDN3 0.53 EX28DRAFT_4448 PPIC-type PPIASE domain 0.28 EX28DRAFT_2784 Uncharacterized protein conserved in bacteria low > 76
Klebsiella michiganensis M5al 0.53 BWI76_RS01000 peptidyl-prolyl cis-trans isomerase 0.31 BWI76_RS22175 recombination regulator RecX — —
Vibrio cholerae E7946 ATCC 55056 0.52 CSW01_18890 peptidyl-prolyl cis-trans isomerase 0.27 CSW01_02880 regulatory protein RecX low > 62
Escherichia coli ECOR38 0.51 HEPCGN_13330 ppiC peptidylprolyl isomerase PpiC 0.31 HEPCGN_19905 recX recombination regulator RecX low > 85

Not shown: 0 genomes with orthologs for PS417_12135 only; 26 genomes with orthologs for PS417_05820 only