Conservation of cofitness between PS417_04910 and PS417_05580 in Pseudomonas simiae WCS417

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas simiae WCS417 1.0 PS417_04910 amino acid ABC transporter permease 1.0 PS417_05580 glycerol uptake facilitator GlpF 0.43 6
Pseudomonas fluorescens SBW25 0.99 PFLU_RS04970 amino acid ABC transporter permease 0.99 PFLU_RS05665 aquaporin low > 109
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS04970 amino acid ABC transporter permease 0.99 PFLU_RS05665 aquaporin low > 109
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_1700 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 0.89 PfGW456L13_1735 Glycerol uptake facilitator protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_17390 amino acid ABC transporter permease 0.87 AO356_18255 glycerol uptake facilitator GlpF low > 104
Pseudomonas sp. RS175 0.92 PFR28_03540 Inner membrane amino-acid ABC transporter permease protein YhdY 0.87 PFR28_03367 Glycerol uptake facilitator protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.92 Pf6N2E2_5404 ABC transporter for D-Alanine, permease component 1 (from data) 0.87 Pf6N2E2_5575 Glycerol uptake facilitator protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.92 AO353_04605 amino acid ABC transporter permease 0.88 AO353_04175 glycerol uptake facilitator GlpF low > 101
Pseudomonas fluorescens FW300-N1B4 0.92 Pf1N1B4_915 Glutamate Aspartate transport system permease protein GltK (TC 3.A.1.3.4) 0.83 Pf1N1B4_766 Glycerol uptake facilitator protein — —
Pseudomonas syringae pv. syringae B728a 0.91 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family 0.82 Psyr_3904 Major intrinsic protein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.91 Psyr_1074 amino acid ABC transporter membrane protein 2, PAAT family 0.82 Psyr_3904 Major intrinsic protein low > 86
Pseudomonas putida KT2440 0.89 PP_1299 putative amino acid ABC transporter - membrane subunit 0.84 PP_1076 aquaglyceroporin low > 96
Pseudomonas stutzeri RCH2 0.78 Psest_3161 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.74 Psest_2772 MIP family channel proteins low > 67
Escherichia coli ECRC62 0.68 BNILDI_02105 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 BNILDI_05625 glpF glycerol uptake facilitator protein GlpF — —
Escherichia coli ECOR27 0.68 NOLOHH_09415 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 NOLOHH_05905 glpF glycerol uptake facilitator protein GlpF low > 57
Escherichia coli ECRC101 0.68 MCAODC_08145 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 MCAODC_04270 glpF glycerol uptake facilitator protein GlpF — —
Escherichia coli ECRC102 0.68 NIAGMN_15385 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 NIAGMN_11525 glpF glycerol uptake facilitator protein GlpF — —
Escherichia coli ECRC99 0.68 KEDOAH_10525 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 KEDOAH_14390 glpF glycerol uptake facilitator protein GlpF — —
Escherichia coli ECRC101 0.68 OKFHMN_17625 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 OKFHMN_13770 glpF glycerol uptake facilitator protein GlpF — —
Escherichia coli BL21 0.68 ECD_03128 putative amino acid ABC transporter permease 0.71 ECD_03812 glycerol facilitator low > 60
Pantoea sp. MT58 0.67 IAI47_02365 amino acid ABC transporter permease 0.71 IAI47_00830 aquaporin family protein low > 76
Escherichia coli ECOR38 0.67 HEPCGN_16445 yhdY Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 HEPCGN_12415 glpF glycerol uptake facilitator protein GlpF low > 85
Escherichia coli BW25113 0.67 b3270 yhdY putative transport system permease protein (VIMSS) 0.71 b3927 glpF glycerol facilitator (NCBI) low > 76
Enterobacter asburiae PDN3 0.67 EX28DRAFT_3323 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 0.71 EX28DRAFT_4400 MIP family channel proteins low > 76
Escherichia fergusonii Becca 0.67 EFB2_00553 Inner membrane amino-acid ABC transporter permease protein YhdY 0.71 EFB2_04691 Glycerol uptake facilitator protein low > 86
Rahnella sp. WP5 0.67 EX31_RS12145 amino acid ABC transporter permease 0.69 EX31_RS14265 aquaporin family protein low > 89
Erwinia tracheiphila SCR3 0.66 LU632_RS19780 amino acid ABC transporter permease 0.70 LU632_RS19700 aquaporin family protein low > 74
Dickeya dianthicola 67-19 0.65 HGI48_RS01245 amino acid ABC transporter permease 0.70 HGI48_RS20480 aquaporin family protein low > 71
Pectobacterium carotovorum WPP14 0.65 HER17_RS20300 amino acid ABC transporter permease 0.69 HER17_RS00830 aquaporin family protein low > 75
Dickeya dianthicola ME23 0.65 DZA65_RS01290 amino acid ABC transporter permease 0.70 DZA65_RS21525 aquaporin family protein low > 75
Enterobacter sp. TBS_079 0.65 MPMX20_04179 Inner membrane amino-acid ABC transporter permease protein YhdY 0.70 MPMX20_04542 Glycerol uptake facilitator protein low > 85
Dickeya dadantii 3937 0.64 DDA3937_RS01260 amino acid ABC transporter permease 0.64 DDA3937_RS00895 aquaporin low > 74
Escherichia coli Nissle 1917 0.64 ECOLIN_RS18785 amino acid ABC transporter permease 0.71 ECOLIN_RS22615 glycerol uptake facilitator protein GlpF low > 52
Vibrio cholerae E7946 ATCC 55056 0.61 CSW01_06845 amino acid ABC transporter permease 0.59 CSW01_17905 aquaporin family protein low > 62

Not shown: 15 genomes with orthologs for PS417_04910 only; 17 genomes with orthologs for PS417_05580 only