Conservation of cofitness between EX31_RS18915 and EX31_RS23330 in Rahnella sp. WP5

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS18915 DNA starvation/stationary phase protection protein Dps 1.0 EX31_RS23330 two-component system response regulator KdpE 0.33 3
Erwinia tracheiphila SCR3 0.88 LU632_RS09460 dps DNA starvation/stationary phase protection protein Dps 0.73 LU632_RS16165 kdpE two-component system response regulator KdpE low > 74
Serratia liquefaciens MT49 0.88 IAI46_07545 DNA starvation/stationary phase protection protein Dps 0.91 IAI46_06160 two-component system response regulator KdpE low > 86
Pantoea sp. MT58 0.86 IAI47_13195 DNA starvation/stationary phase protection protein Dps 0.77 IAI47_13830 two-component system response regulator KdpE low > 76
Pectobacterium carotovorum WPP14 0.83 HER17_RS13060 DNA starvation/stationary phase protection protein Dps 0.80 HER17_RS15050 two-component system response regulator KdpE low > 75
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.82 GFF707 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 0.76 GFF4606 sensor histidine kinase low > 78
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2174 DNA-binding ferritin-like protein (oxidative damage protectant) 0.73 EX28DRAFT_2284 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain low > 76
Enterobacter sp. TBS_079 0.82 MPMX20_01442 DNA protection during starvation protein 0.73 MPMX20_01337 KDP operon transcriptional regulatory protein KdpE low > 85
Klebsiella michiganensis M5al 0.81 BWI76_RS08980 DNA starvation/stationary phase protection protein 0.76 BWI76_RS08300 DNA-binding response regulator — —
Escherichia coli BW25113 0.81 b0812 dps DNA protection during starvation conditions (NCBI) 0.76 b0694 kdpE DNA-binding response regulator in two-component regulatory system with KdpD (NCBI) low > 76
Escherichia coli BL21 0.81 ECD_00779 Fe-binding and storage protein; stress-inducible DNA-binding protein 0.76 ECD_00651 response regulator in two-component regulatory system with KdpD 0.29 53
Escherichia coli ECRC102 0.81 NIAGMN_04250 dps DNA starvation/stationary phase protection protein Dps 0.76 NIAGMN_05135 kdpE two-component system response regulator KdpE — —
Escherichia coli ECRC98 0.81 JDDGAC_09840 dps DNA starvation/stationary phase protection protein Dps 0.76 JDDGAC_10730 kdpE two-component system response regulator KdpE low > 86
Escherichia coli ECOR27 0.81 NOLOHH_22555 dps DNA starvation/stationary phase protection protein Dps 0.77 NOLOHH_23460 kdpE two-component system response regulator KdpE low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.81 OHPLBJKB_02901 DNA protection during starvation protein 0.76 OHPLBJKB_03023 KDP operon transcriptional regulatory protein KdpE low > 73
Escherichia coli ECRC100 0.81 OKFHMN_06205 dps DNA starvation/stationary phase protection protein Dps 0.76 OKFHMN_07080 kdpE two-component system response regulator KdpE low > 80
Escherichia coli ECRC101 0.81 MCAODC_25420 dps DNA starvation/stationary phase protection protein Dps 0.76 MCAODC_26295 kdpE two-component system response regulator KdpE low > 87
Escherichia coli ECRC62 0.81 BNILDI_20835 dps DNA starvation/stationary phase protection protein Dps 0.77 BNILDI_21465 kdpE two-component system response regulator KdpE low > 75
Escherichia fergusonii Becca 0.81 EFB2_03293 DNA protection during starvation protein 0.77 EFB2_03402 KDP operon transcriptional regulatory protein KdpE low > 86
Escherichia coli ECOR38 0.81 HEPCGN_01835 dps DNA starvation/stationary phase protection protein Dps 0.77 HEPCGN_01155 kdpE two-component system response regulator KdpE low > 87
Escherichia coli ECRC99 0.81 KEDOAH_21705 dps DNA starvation/stationary phase protection protein Dps 0.76 KEDOAH_20890 kdpE two-component system response regulator KdpE — —
Escherichia coli Nissle 1917 0.80 ECOLIN_RS04330 DNA starvation/stationary phase protection protein Dps 0.77 ECOLIN_RS03750 two-component system response regulator KdpE — —
Dickeya dianthicola 67-19 0.76 HGI48_RS08890 DNA starvation/stationary phase protection protein Dps 0.81 HGI48_RS06410 two-component system response regulator KdpE low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS09205 DNA starvation/stationary phase protection protein Dps 0.80 DZA65_RS06755 two-component system response regulator KdpE — —
Dickeya dadantii 3937 0.75 DDA3937_RS08815 DNA starvation/stationary phase protection protein Dps 0.81 DDA3937_RS06365 two-component system response regulator KdpE low > 74
Agrobacterium fabrum C58 0.55 Atu2477 DNA oxidation protective protein, not DNA-binding 0.39 Atu3786 two component response regulator low > 89
Alteromonas macleodii MIT1002 0.31 MIT1002_01444 DNA protection during starvation protein 0.33 MIT1002_01389 KDP operon transcriptional regulatory protein KdpE low > 70
Acinetobacter radioresistens SK82 0.17 MPMX26_01495 DNA protection during starvation protein 2 0.40 MPMX26_02240 Transcriptional regulatory protein KdpE — —
Acidovorax sp. GW101-3H11 0.17 Ac3H11_786 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 0.63 Ac3H11_2407 sensor histidine kinase — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.17 GFF2804 Non-specific DNA-binding protein Dps / Iron-binding ferritin-like antioxidant protein / Ferroxidase (EC 1.16.3.1) 0.44 GFF4475 sensor histidine kinase low > 90
Azospirillum brasilense Sp245 0.16 AZOBR_RS12945 ferritin 0.44 AZOBR_RS23980 Fis family transcriptional regulator — —
Caulobacter crescentus NA1000 0.16 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase 0.45 CCNA_01667 two-component response regulator kdpE low > 66
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_02966 non-specific DNA-binding protein Dps/iron-binding ferritin-like antioxidant protein/ferroxidase 0.45 CCNA_01667 two-component response regulator kdpE low > 67
Pseudomonas simiae WCS417 0.15 PS417_22480 ferritin 0.50 PS417_08305 transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.15 PFLU_RS24120 DNA starvation/stationary phase protection protein 0.50 PFLU_RS08245 response regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.15 PFLU_RS24120 DNA starvation/stationary phase protection protein 0.50 PFLU_RS08245 response regulator low > 109
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_1404 Ferritin and Dps 0.51 Psyr_2051 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_1404 Ferritin and Dps 0.51 Psyr_2051 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS19715 Dps family protein 0.46 ABZR86_RS13215 response regulator low > 74
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS02145 ferritin 0.57 HSERO_RS18850 transcriptional regulator — —

Not shown: 4 genomes with orthologs for EX31_RS18915 only; 36 genomes with orthologs for EX31_RS23330 only