Conservation of cofitness between EX31_RS03165 and EX31_RS19525 in Rahnella sp. WP5

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rahnella sp. WP5 1.0 EX31_RS03165 CdaR family transcriptional regulator 1.0 EX31_RS19525 GSH-dependent disulfide bond oxidoreductase 0.41 6
Pectobacterium carotovorum WPP14 0.85 HER17_RS05665 CdaR family transcriptional regulator 0.78 HER17_RS07060 GSH-dependent disulfide bond oxidoreductase low > 75
Dickeya dianthicola ME23 0.84 DZA65_RS17080 CdaR family transcriptional regulator 0.78 DZA65_RS15300 GSH-dependent disulfide bond oxidoreductase low > 75
Dickeya dadantii 3937 0.84 DDA3937_RS15855 CdaR family transcriptional regulator 0.79 DDA3937_RS14400 GSH-dependent disulfide bond oxidoreductase low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.83 GFF59 Sugar diacid utilization regulator SdaR 0.73 GFF1913 Probable glutathione S-transferase (EC 2.5.1.18), YfcG homolog low > 78
Escherichia coli ECRC62 0.83 BNILDI_09075 cdaR DNA-binding transcriptional regulator CdaR 0.71 BNILDI_13305 yfcG GSH-dependent disulfide bond oxidoreductase low > 75
Escherichia fergusonii Becca 0.83 EFB2_03882 Carbohydrate diacid regulator 0.72 EFB2_01556 Disulfide-bond oxidoreductase YfcG low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.83 OHPLBJKB_03500 Carbohydrate diacid regulator 0.71 OHPLBJKB_01403 Disulfide-bond oxidoreductase YfcG low > 73
Escherichia coli BL21 0.83 ECD_00161 carbohydrate diacid regulon transcriptional regulator; autoregulator 0.71 ECD_02227 GSH-dependent disulfide bond oxidoreductase low > 61
Escherichia coli ECOR38 0.83 HEPCGN_08200 cdaR DNA-binding transcriptional regulator CdaR 0.72 HEPCGN_21970 yfcG GSH-dependent disulfide bond oxidoreductase low > 87
Escherichia coli Nissle 1917 0.83 ECOLIN_RS00900 DNA-binding transcriptional regulator CdaR 0.72 ECOLIN_RS13360 GSH-dependent disulfide bond oxidoreductase — —
Escherichia coli ECOR27 0.83 NOLOHH_02595 cdaR DNA-binding transcriptional regulator CdaR 0.71 NOLOHH_14385 yfcG GSH-dependent disulfide bond oxidoreductase low > 75
Escherichia coli ECRC98 0.83 JDDGAC_13845 cdaR DNA-binding transcriptional regulator CdaR 0.72 JDDGAC_26730 yfcG GSH-dependent disulfide bond oxidoreductase low > 86
Escherichia coli BW25113 0.83 b0162 yaeG orf, hypothetical protein (VIMSS) 0.71 b2302 yfcG predicted glutathione S-transferase (NCBI) low > 76
Escherichia coli ECRC99 0.83 KEDOAH_17905 cdaR DNA-binding transcriptional regulator CdaR 0.72 KEDOAH_05430 yfcG GSH-dependent disulfide bond oxidoreductase — —
Escherichia coli ECRC101 0.83 MCAODC_00765 cdaR DNA-binding transcriptional regulator CdaR 0.72 MCAODC_13805 yfcG GSH-dependent disulfide bond oxidoreductase low > 87
Escherichia coli ECRC100 0.83 OKFHMN_10250 cdaR DNA-binding transcriptional regulator CdaR 0.72 OKFHMN_22765 yfcG GSH-dependent disulfide bond oxidoreductase low > 80
Escherichia coli ECRC102 0.83 NIAGMN_08100 cdaR DNA-binding transcriptional regulator CdaR 0.72 NIAGMN_20535 yfcG GSH-dependent disulfide bond oxidoreductase — —
Klebsiella michiganensis M5al 0.82 BWI76_RS05185 CdaR family transcriptional regulator 0.74 BWI76_RS20290 thiol:disulfide oxidoreductase low > 92
Enterobacter sp. TBS_079 0.82 MPMX20_00848 Carbohydrate diacid regulator 0.74 MPMX20_03237 Disulfide-bond oxidoreductase YfcG low > 85
Enterobacter asburiae PDN3 0.82 EX28DRAFT_3751 Sugar diacid utilization regulator 0.74 EX28DRAFT_0302 Glutathione S-transferase low > 76
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.5386.1 Sugar diacid utilization regulator SdaR 0.61 Xcc-8004.5030.1 Glutathione S-transferase (EC 2.5.1.18) low > 74
Shewanella oneidensis MR-1 0.43 SO1774 hypothetical Sugar diacid utilization regulator (NCBI ptt file) 0.49 SO1576 glutathione S-transferase family protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_2682 CdaR family transcriptional regulator (RefSeq) 0.50 Shewana3_2866 glutathione S-transferase domain-containing protein (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_18670 CdaR family transcriptional regulator 0.46 CSW01_17150 thiol:disulfide oxidoreductase low > 62
Serratia liquefaciens MT49 0.34 IAI46_05255 helix-turn-helix domain-containing protein 0.81 IAI46_17770 GSH-dependent disulfide bond oxidoreductase low > 86
Paraburkholderia sabiae LMG 24235 0.29 QEN71_RS12200 sugar diacid recognition domain-containing protein 0.56 QEN71_RS24045 glutathione binding-like protein low > 153
Pseudomonas simiae WCS417 0.28 PS417_13975 CdaR family transcriptional regulator 0.67 PS417_06435 glutathione S-transferase low > 88
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_2940 Sugar diacid utilization regulator SdaR 0.43 PfGW456L13_2053 Glutathione S-transferase (EC 2.5.1.18) low > 87
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_4999 Sugar diacid utilization regulator SdaR 0.67 Pf1N1B4_3183 Glutathione S-transferase (EC 2.5.1.18) low > 87
Pseudomonas fluorescens SBW25-INTG 0.27 PFLU_RS14640 CdaR family transcriptional regulator 0.67 PFLU_RS06500 thiol:disulfide oxidoreductase low > 109
Pseudomonas fluorescens SBW25 0.27 PFLU_RS14640 CdaR family transcriptional regulator 0.67 PFLU_RS06500 thiol:disulfide oxidoreductase low > 109
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_22865 CdaR family transcriptional regulator 0.39 AO356_01380 glutathione S-transferase 0.25 40
Pseudomonas sp. RS175 0.26 PFR28_02470 Carbohydrate diacid regulator 0.38 PFR28_01289 Disulfide-bond oxidoreductase YfcG low > 88
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_26905 CdaR family transcriptional regulator 0.46 AO353_01700 glutathione S-transferase low > 101
Pseudomonas putida KT2440 0.26 PP_3177 conserved protein of unknown function 0.39 PP_4104 Glutathione S-transferase family protein low > 96

Not shown: 6 genomes with orthologs for EX31_RS03165 only; 38 genomes with orthologs for EX31_RS19525 only