Conservation of cofitness between EFB2_00846 and EFB2_01126 in Escherichia fergusonii Becca

27 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia fergusonii Becca 1.0 EFB2_00846 Type II secretion system protein E 1.0 EFB2_01126 tRNA pseudouridine synthase C 0.34 17
Escherichia coli ECOR38 0.98 HEPCGN_18055 gspE general secretion pathway protein E 0.99 HEPCGN_19465 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli BL21 0.98 ECD_02837 putative type II secretion protein GspE 0.99 ECD_02636 tRNA(Ile1,Asp) pseudouridine(65) synthase low > 61
Escherichia coli ECOR27 0.98 NOLOHH_10980 gspE general secretion pathway protein E 0.99 NOLOHH_12090 truC tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.95 OHPLBJKB_00740 Type II secretion system protein E 0.99 OHPLBJKB_00940 tRNA pseudouridine synthase C low > 73
Vibrio cholerae E7946 ATCC 55056 0.66 CSW01_13785 type II secretion system protein GspE 0.62 CSW01_04555 tRNA pseudouridine(65) synthase TruC — —
Shewanella amazonensis SB2B 0.64 Sama_0170 general secretion pathway protein E (RefSeq) 0.51 Sama_1131 pseudouridylate synthase (RefSeq) low > 62
Shewanella loihica PV-4 0.63 Shew_3618 general secretory pathway protein E (RefSeq) 0.48 Shew_2643 pseudouridylate synthase (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.62 MIT1002_03977 Type II traffic warden ATPase 0.47 MIT1002_00998 tRNA pseudouridine synthase C low > 70
Shewanella sp. ANA-3 0.62 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) 0.51 Shewana3_2824 tRNA pseudouridine synthase C (RefSeq) low > 73
Dickeya dianthicola ME23 0.61 DZA65_RS15675 type II secretion system ATPase GspE 0.73 DZA65_RS05425 tRNA pseudouridine(65) synthase TruC low > 75
Dickeya dianthicola 67-19 0.60 HGI48_RS14730 type II secretion system ATPase GspE 0.73 HGI48_RS05085 tRNA pseudouridine(65) synthase TruC low > 71
Dickeya dadantii 3937 0.60 DDA3937_RS14795 type II secretion system ATPase GspE 0.74 DDA3937_RS05085 tRNA pseudouridine(65) synthase TruC low > 74
Marinobacter adhaerens HP15 0.58 HP15_1602 type II secretion system protein E 0.39 HP15_1021 tRNA pseudouridine synthase C low > 73
Klebsiella michiganensis M5al 0.57 BWI76_RS05085 general secretion pathway protein GspE 0.91 BWI76_RS22850 tRNA pseudouridine synthase TruC low > 92
Pectobacterium carotovorum WPP14 0.56 HER17_RS06690 type II secretion system ATPase GspE 0.72 HER17_RS16365 tRNA pseudouridine(65) synthase TruC low > 75
Escherichia coli ECRC101 0.55 MCAODC_15270 gspE type II secretion system ATPase GspE 0.99 MCAODC_10735 truC tRNA pseudouridine(65) synthase TruC low > 87
Escherichia coli ECRC98 0.55 JDDGAC_30300 gspE type II secretion system ATPase GspE 0.99 JDDGAC_23875 truC tRNA pseudouridine(65) synthase TruC low > 86
Escherichia coli ECRC100 0.55 OKFHMN_00280 gspE type II secretion system ATPase GspE 0.99 OKFHMN_20210 truC tRNA pseudouridine(65) synthase TruC low > 80
Escherichia coli ECRC102 0.55 NIAGMN_28600 gspE type II secretion system ATPase GspE 0.99 NIAGMN_17980 truC tRNA pseudouridine(65) synthase TruC — —
Erwinia tracheiphila SCR3 0.51 LU632_RS25235 gspE type II secretion system ATPase GspE 0.68 LU632_RS06295 truC tRNA pseudouridine(65) synthase TruC low > 74
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.943.1 General secretion pathway protein E 0.32 Xcc-8004.296.1 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 74
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2029 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) 0.38 Ac3H11_3112 tRNA pseudouridine synthase C (EC 4.2.1.70) low > 79
Rhodanobacter denitrificans MT42 0.38 LRK55_RS09600 type II secretion system ATPase GspE 0.38 LRK55_RS10270 pseudouridine synthase low > 63
Lysobacter sp. OAE881 0.38 ABIE51_RS04520 type II secretion system ATPase GspE 0.31 ABIE51_RS00215 pseudouridine synthase low > 62
Rhodanobacter denitrificans FW104-10B01 0.38 LRK54_RS09960 type II secretion system ATPase GspE 0.37 LRK54_RS10630 pseudouridine synthase low > 59
Rhodanobacter sp. FW510-T8 0.38 OKGIIK_16215 gspE type II secretion system ATPase GspE 0.38 OKGIIK_13270 pseudouridylate synthase low > 52
Dechlorosoma suillum PS 0.34 Dsui_1320 type IV-A pilus assembly ATPase PilB 0.43 Dsui_3127 23S RNA-specific pseudouridylate synthase low > 51

Not shown: 28 genomes with orthologs for EFB2_00846 only; 15 genomes with orthologs for EFB2_01126 only