Conservation of cofitness between ECD_04080 and ECD_03828 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_04080 D-alanine/D-serine/glycine transporter 1.0 ECD_03828 catalase-peroxidase HPI, heme b-containing 0.59 4
Escherichia coli ECRC62 1.00 BNILDI_07190 cycA D-serine/D-alanine/glycine transporter 1.00 BNILDI_05730 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC99 1.00 KEDOAH_16085 cycA D-serine/D-alanine/glycine transporter 1.00 KEDOAH_14500 katG catalase/peroxidase HPI — —
Escherichia coli ECRC101 1.00 MCAODC_02585 cycA D-serine/D-alanine/glycine transporter 1.00 MCAODC_04160 katG catalase/peroxidase HPI low > 87
Escherichia coli ECRC102 1.00 NIAGMN_09920 cycA D-serine/D-alanine/glycine transporter 1.00 NIAGMN_11415 katG catalase/peroxidase HPI — —
Escherichia coli ECOR27 1.00 NOLOHH_04330 cycA D-serine/D-alanine/glycine transporter 1.00 NOLOHH_05805 katG catalase/peroxidase HPI low > 75
Escherichia coli ECRC100 1.00 OKFHMN_12070 cycA D-serine/D-alanine/glycine transporter 1.00 OKFHMN_13660 katG catalase/peroxidase HPI low > 80
Escherichia coli ECRC98 1.00 JDDGAC_15710 cycA D-serine/D-alanine/glycine transporter 1.00 JDDGAC_17285 katG catalase/peroxidase HPI low > 86
Escherichia coli BW25113 1.00 b4208 cycA D-alanine/D-serine/glycine transporter (NCBI) 1.00 b3942 katG catalase/hydroperoxidase HPI(I) (NCBI) low > 76
Escherichia coli Nissle 1917 0.99 ECOLIN_RS24450 D-serine/D-alanine/glycine transporter 1.00 ECOLIN_RS22765 catalase/peroxidase HPI low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_03827 D-serine/D-alanine/glycine transporter 1.00 OHPLBJKB_04108 Catalase-peroxidase low > 73
Escherichia fergusonii Becca 0.99 EFB2_04320 D-serine/D-alanine/glycine transporter 1.00 EFB2_04671 Catalase-peroxidase low > 86
Escherichia coli ECOR38 0.99 HEPCGN_10275 cycA D-serine/D-alanine/glycine transporter 1.00 HEPCGN_12305 katG catalase/peroxidase HPI low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF861 D-serine/D-alanine/glycine transporter 0.91 GFF2330 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 78
Enterobacter sp. TBS_079 0.96 MPMX20_00484 D-serine/D-alanine/glycine transporter 0.87 MPMX20_04528 Catalase-peroxidase low > 85
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3391 Gamma-aminobutyrate permease and related permeases 0.87 EX28DRAFT_4414 catalase/peroxidase HPI low > 76
Klebsiella michiganensis M5al 0.92 BWI76_RS02700 D-serine/D-alanine/glycine transporter 0.81 BWI76_RS13925 catalase/peroxidase HPI low > 92
Serratia liquefaciens MT49 0.85 IAI46_09060 D-serine/D-alanine/glycine transporter 0.61 IAI46_17030 catalase/peroxidase HPI low > 86
Rahnella sp. WP5 0.80 EX31_RS24110 D-serine/D-alanine/glycine transporter 0.81 EX31_RS11140 catalase/peroxidase HPI low > 89
Pectobacterium carotovorum WPP14 0.78 HER17_RS07690 D-serine/D-alanine/glycine transporter 0.56 HER17_RS09165 catalase/peroxidase HPI low > 75
Erwinia tracheiphila SCR3 0.76 LU632_RS10160 cycA D-serine/D-alanine/glycine transporter 0.81 LU632_RS19500 katG catalase/peroxidase HPI — —
Pantoea sp. MT58 0.76 IAI47_12495 D-serine/D-alanine/glycine transporter 0.80 IAI47_07215 catalase/peroxidase HPI low > 76
Dickeya dadantii 3937 0.76 DDA3937_RS13720 D-serine/D-alanine/glycine transporter 0.61 DDA3937_RS07265 catalase/peroxidase HPI low > 74
Pseudomonas putida KT2440 0.74 PP_4840 D-alanine, beta-alanine, D-serine, glycine permease 0.60 PP_3668 Catalase-peroxidase low > 96
Dickeya dianthicola ME23 0.73 DZA65_RS14305 D-serine/D-alanine/glycine transporter 0.62 DZA65_RS08685 catalase/peroxidase HPI low > 75
Dickeya dianthicola 67-19 0.71 HGI48_RS13815 D-serine/D-alanine/glycine transporter 0.61 HGI48_RS08090 catalase/peroxidase HPI low > 71
Xanthomonas campestris pv. campestris strain 8004 0.65 Xcc-8004.804.1 D-serine/D-alanine/glycine transporter 0.60 Xcc-8004.3762.1 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 74
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_29455 amino acid transporter 0.61 AO356_07735 hydroperoxidase low > 104
Mycobacterium tuberculosis H37Rv 0.55 Rv1704c Probable D-serine/alanine/glycine transporter protein CycA 0.51 Rv1908c Catalase-peroxidase-peroxynitritase T KatG low > 58
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_4976 D-serine/D-alanine/glycine transporter 0.58 Pf1N1B4_4230 Catalase (EC 1.11.1.6) / Peroxidase (EC 1.11.1.7) low > 87
Pseudomonas fluorescens FW300-N2E3 0.54 AO353_25190 amino acid transporter 0.60 AO353_23210 hydroperoxidase low > 101
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS28305 L-threonine:H+ symporter (from data) 0.61 RR42_RS26270 hydroperoxidase low > 128
Ralstonia solanacearum UW163 0.45 UW163_RS22065 amino acid permease 0.61 UW163_RS00460 catalase/peroxidase HPI — —
Ralstonia solanacearum IBSBF1503 0.45 RALBFv3_RS20930 amino acid permease 0.61 RALBFv3_RS13105 catalase/peroxidase HPI low > 76

Not shown: 7 genomes with orthologs for ECD_04080 only; 41 genomes with orthologs for ECD_03828 only