Conservation of cofitness between ECD_02953 and ECD_03488 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02953 23S rRNA m(2)G1835 methyltransferase, SAM-dependent 1.0 ECD_03488 UDP-glucose:(heptosyl)lipopolysaccharide alpha-1,3-glucosyltransferase; lipopolysaccharide core biosynthesis protein; lipopolysaccharide glucosyltransferase I low > 61
Escherichia coli ECOR38 1.00 HEPCGN_17415 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 HEPCGN_14480 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 87
Escherichia coli BW25113 1.00 b3084 ygjO putative enzyme (VIMSS) 0.91 b3631 rfaG glucosyltransferase I (NCBI) low > 76
Escherichia coli ECOR27 0.99 NOLOHH_10360 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 NOLOHH_07535 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 75
Escherichia coli ECRC62 0.99 BNILDI_01155 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 BNILDI_03980 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17790 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 1.00 ECOLIN_RS20695 glycosyltransferase family 4 protein — —
Escherichia coli ECRC102 0.99 NIAGMN_16325 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 NIAGMN_13415 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECRC98 0.99 JDDGAC_22195 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 JDDGAC_19280 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 86
Escherichia coli ECRC100 0.99 OKFHMN_18560 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 OKFHMN_15655 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 80
Escherichia coli ECRC99 0.99 KEDOAH_09585 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 KEDOAH_12495 rfaG Lipopolysaccharide core biosynthesis protein RfaG — —
Escherichia coli ECRC101 0.99 MCAODC_09075 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.99 MCAODC_06165 rfaG Lipopolysaccharide core biosynthesis protein RfaG low > 87
Escherichia fergusonii Becca 0.99 EFB2_00728 Ribosomal RNA large subunit methyltransferase G 1.00 EFB2_00182 Lipopolysaccharide core biosynthesis protein RfaG low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00618 Ribosomal RNA large subunit methyltransferase G 0.99 OHPLBJKB_00071 Lipopolysaccharide core biosynthesis protein RfaG low > 73
Enterobacter asburiae PDN3 0.93 EX28DRAFT_3153 16S RNA G1207 methylase RsmC 0.12 EX28DRAFT_3879 Glycosyltransferase low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_03995 Ribosomal RNA large subunit methyltransferase G 0.12 MPMX20_00106 Lipopolysaccharide core biosynthesis protein RfaG low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.92 GFF3186 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.90 GFF380 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) low > 78
Klebsiella michiganensis M5al 0.71 BWI76_RS24680 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.13 BWI76_RS27300 glucuronic acid transferase — —
Serratia liquefaciens MT49 0.67 IAI46_22185 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.11 IAI46_24780 glycosyltransferase family 4 protein — —
Erwinia tracheiphila SCR3 0.65 LU632_RS02335 rlmG 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.13 LU632_RS21955 glycosyltransferase family 4 protein low > 74
Pantoea sp. MT58 0.62 IAI47_02950 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.12 IAI47_00655 glycosyltransferase family 4 protein low > 76
Dickeya dadantii 3937 0.61 DDA3937_RS02850 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.14 DDA3937_RS20460 glycosyltransferase family 4 protein — —
Rahnella sp. WP5 0.58 EX31_RS08350 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.14 EX31_RS14435 glycosyltransferase family 4 protein low > 89
Dickeya dianthicola 67-19 0.58 HGI48_RS02825 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.13 HGI48_RS00750 glycosyltransferase family 4 protein — —
Dickeya dianthicola ME23 0.58 DZA65_RS03000 23S rRNA (guanine(1835)-N(2))-methyltransferase RlmG 0.13 DZA65_RS00805 glycosyltransferase family 4 protein — —
Pseudomonas stutzeri RCH2 0.37 Psest_3440 16S RNA G1207 methylase RsmC 0.51 Psest_0453 Glycosyltransferase — —
Pseudomonas putida KT2440 0.36 PP_4648 Ribosomal RNA large subunit methyltransferase G 0.51 PP_0343 lipopolysaccharide glucosyltransferase I — —
Pseudomonas sp. S08-1 0.35 OH686_16135 23S rRNA (guanine(1835)-N(2))-methyltransferase 0.48 OH686_09680 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG — —
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_13950 50S rRNA methyltransferase 0.51 AO353_12885 glucosyltransferase I RfaG — —
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1438 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.50 PfGW456L13_210 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) — —
Pseudomonas simiae WCS417 0.34 PS417_24335 50S rRNA methyltransferase 0.51 PS417_02240 glucosyltransferase I RfaG — —
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.51 PFLU_RS02295 glycosyltransferase family 4 protein — —
Pseudomonas fluorescens SBW25 0.34 PFLU_RS26260 class I SAM-dependent methyltransferase 0.51 PFLU_RS02295 glycosyltransferase family 4 protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.51 Psyr_0522 Glycosyl transferase, group 1 — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_4279 16S rRNA m(2)G 1207 methyltransferase / 23S rRNA m(2)G-1835 methyltransferase 0.51 Psyr_0522 Glycosyl transferase, group 1 — —
Pseudomonas sp. RS175 0.33 PFR28_03798 Ribosomal RNA large subunit methyltransferase G 0.51 PFR28_05065 Lipopolysaccharide core biosynthesis protein RfaG — —
Pseudomonas fluorescens FW300-N2C3 0.33 AO356_15650 50S rRNA methyltransferase 0.50 AO356_08940 glucosyltransferase I RfaG — —
Pseudomonas fluorescens FW300-N2E2 0.33 Pf6N2E2_5071 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.50 Pf6N2E2_3669 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2763 23S rRNA (guanine-N-2-) -methyltransferase rlmG (EC 2.1.1.-) 0.50 Pf1N1B4_1471 UDP-glucose:(heptosyl) LPS alpha1,3-glucosyltransferase WaaG (EC 2.4.1.-) — —

Not shown: 8 genomes with orthologs for ECD_02953 only; 5 genomes with orthologs for ECD_03488 only