Conservation of cofitness between ECD_03421 and ECD_03280 in Escherichia coli BL21

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03421 xylose divergent operon transcriptional activator 1.0 ECD_03280 glycogen phosphorylase low > 61
Escherichia coli ECRC99 1.00 KEDOAH_12215 xylR DNA-binding transcriptional regulator XylR 1.00 KEDOAH_11235 glgP glycogen phosphorylase — —
Escherichia coli ECRC101 1.00 MCAODC_06450 xylR DNA-binding transcriptional regulator XylR 1.00 MCAODC_07435 glgP glycogen phosphorylase low > 87
Escherichia coli ECRC98 1.00 JDDGAC_19565 xylR DNA-binding transcriptional regulator XylR 1.00 JDDGAC_20535 glgP glycogen phosphorylase low > 86
Escherichia coli ECRC100 1.00 OKFHMN_15935 xylR DNA-binding transcriptional regulator XylR 1.00 OKFHMN_16905 glgP glycogen phosphorylase low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20410 D-xylose utilization transcriptional activator XylR 1.00 ECOLIN_RS19620 glycogen phosphorylase low > 55
Escherichia coli ECOR27 1.00 NOLOHH_07880 xylR DNA-binding transcriptional regulator XylR 1.00 NOLOHH_08695 glgP glycogen phosphorylase low > 75
Escherichia coli ECRC102 1.00 NIAGMN_13695 xylR DNA-binding transcriptional regulator XylR 1.00 NIAGMN_14675 glgP glycogen phosphorylase — —
Escherichia coli BW25113 1.00 b3569 xylR DNA-binding transcriptional activator, xylose-binding (NCBI) 1.00 b3428 glgP glycogen phosphorylase (NCBI) low > 76
Escherichia coli ECRC62 1.00 BNILDI_03665 xylR DNA-binding transcriptional regulator XylR 1.00 BNILDI_02820 glgP glycogen phosphorylase low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00135 Xylose operon regulatory protein 1.00 OHPLBJKB_00273 Maltodextrin phosphorylase low > 73
Escherichia coli ECOR38 1.00 HEPCGN_14820 xylR DNA-binding transcriptional regulator XylR 1.00 HEPCGN_15720 glgP glycogen phosphorylase low > 87
Escherichia fergusonii Becca 1.00 EFB2_00238 Xylose operon regulatory protein 1.00 EFB2_00391 Maltodextrin phosphorylase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.91 GFF442 Xylose activator XylR (AraC family) 0.92 GFF579 Glycogen phosphorylase (EC 2.4.1.1) low > 78
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3834 Transcriptional regulators 0.89 EX28DRAFT_4119 glycogen/starch/alpha-glucan phosphorylases low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_00161 Xylose operon regulatory protein 0.89 MPMX20_04310 Maltodextrin phosphorylase low > 85
Klebsiella michiganensis M5al 0.89 BWI76_RS27045 XylR family transcriptional regulator 0.90 BWI76_RS26195 glycogen phosphorylase low > 92
Pantoea sp. MT58 0.84 IAI47_00175 XylR family transcriptional regulator 0.83 IAI47_01700 glycogen phosphorylase low > 76
Rahnella sp. WP5 0.84 EX31_RS09745 XylR family transcriptional regulator 0.79 EX31_RS05005 glycogen phosphorylase low > 89
Serratia liquefaciens MT49 0.82 IAI46_00300 DNA-binding transcriptional regulator 0.77 IAI46_23920 glycogen phosphorylase low > 86
Pectobacterium carotovorum WPP14 0.82 HER17_RS21065 XylR family transcriptional regulator 0.79 HER17_RS01505 glycogen phosphorylase low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS00330 XylR family transcriptional regulator 0.80 HGI48_RS19835 glycogen phosphorylase low > 71
Dickeya dianthicola ME23 0.81 DZA65_RS00330 DNA-binding transcriptional regulator 0.79 DZA65_RS20910 glycogen phosphorylase low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS20915 DNA-binding transcriptional regulator 0.80 DDA3937_RS19725 glycogen phosphorylase low > 74
Paraburkholderia sabiae LMG 24235 0.49 QEN71_RS25880 DNA-binding transcriptional regulator 0.61 QEN71_RS14305 glycogen/starch/alpha-glucan phosphorylase low > 153
Paraburkholderia bryophila 376MFSha3.1 0.47 H281DRAFT_03875 transcriptional regulator, AraC family 0.61 H281DRAFT_03054 glycogen phosphorylase low > 103
Burkholderia phytofirmans PsJN 0.46 BPHYT_RS32830 AraC family transcriptional regulator 0.61 BPHYT_RS29590 glycogen phosphorylase low > 109
Paraburkholderia graminis OAS925 0.46 ABIE53_004928 LacI family transcriptional regulator 0.61 ABIE53_005130 starch phosphorylase low > 113
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_2882 transcriptional regulator, AraC family 0.47 Psyr_0374 Phosphorylase low > 86
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_2882 transcriptional regulator, AraC family 0.47 Psyr_0374 Phosphorylase low > 86
Pseudomonas simiae WCS417 0.45 PS417_10950 AraC family transcriptional regulator 0.47 PS417_01675 maltodextrin phosphorylase low > 88
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_28495 AraC family transcriptional regulator 0.47 AO356_09685 maltodextrin phosphorylase low > 104
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_1453 Xylose activator XylR (AraC family) 0.47 Pf6N2E2_3816 Glycogen phosphorylase (EC 2.4.1.1) low > 103
Pseudomonas sp. RS175 0.44 PFR28_02347 Xylose operon regulatory protein 0.47 PFR28_04953 Maltodextrin phosphorylase low > 88
Pseudomonas fluorescens SBW25 0.43 PFLU_RS11310 DNA-binding transcriptional regulator 0.47 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.43 PFLU_RS11310 DNA-binding transcriptional regulator 0.47 PFLU_RS01730 glycogen/starch/alpha-glucan phosphorylase low > 109

Not shown: 6 genomes with orthologs for ECD_03421 only; 22 genomes with orthologs for ECD_03280 only