Conservation of cofitness between ECD_02518 and ECD_02837 in Escherichia coli BL21

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 1.0 ECD_02837 putative type II secretion protein GspE 0.59 14
Escherichia coli ECRC98 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.55 JDDGAC_30300 gspE type II secretion system ATPase GspE low > 86
Escherichia coli ECRC102 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.55 NIAGMN_28600 gspE type II secretion system ATPase GspE — —
Escherichia coli ECRC101 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.55 MCAODC_15270 gspE type II secretion system ATPase GspE low > 87
Escherichia coli ECRC100 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.55 OKFHMN_00280 gspE type II secretion system ATPase GspE low > 80
Escherichia coli ECOR27 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.99 NOLOHH_10980 gspE general secretion pathway protein E low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT 0.99 OHPLBJKB_00740 Type II secretion system protein E low > 73
Escherichia fergusonii Becca 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT 0.98 EFB2_00846 Type II secretion system protein E low > 86
Escherichia coli ECOR38 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase 0.99 HEPCGN_18055 gspE general secretion pathway protein E low > 87
Pseudomonas sp. S08-1 0.77 OH686_11880 4-aminobutyrate transaminase 0.58 OH686_11785 type II secretion system protein E low > 80
Pseudomonas stutzeri RCH2 0.76 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type 0.56 Psest_4202 general secretory pathway protein E low > 67
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_10715 4-aminobutyrate aminotransferase 0.52 AO356_09340 type II secretion system protein GspE low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.52 Pf6N2E2_3745 General secretion pathway protein E low > 103
Pseudomonas putida KT2440 0.73 PP_0214 4-aminobutyrate aminotransferase 0.48 PP_1047 putative protein secretion protein for export low > 96
Pseudomonas fluorescens GW456-L13 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.51 PfGW456L13_265 General secretion pathway protein E low > 87
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) 0.52 AO353_12550 type II secretion system protein GspE low > 101
Pseudomonas syringae pv. syringae B728a 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.40 Psyr_3151 type II secretion system protein E (GspE) low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme 0.40 Psyr_3151 type II secretion system protein E (GspE) low > 86
Shewanella amazonensis SB2B 0.67 Sama_2636 gamma-aminobutyrate transaminase (EC 2.6.1.19) (from data) 0.64 Sama_0170 general secretion pathway protein E (RefSeq) low > 62
Shewanella sp. ANA-3 0.66 Shewana3_3091 4-aminobutyrate aminotransferase (RefSeq) 0.62 Shewana3_0152 type II secretion system protein E (GspE) (RefSeq) low > 73
Shewanella oneidensis MR-1 0.66 SO1276 gabT 4-aminobutyrate aminotransferase (NCBI ptt file) 0.62 SO0167 gspE general secretion pathway protein E (NCBI ptt file) low > 76
Acidovorax sp. GW101-3H11 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) 0.44 Ac3H11_2029 General secretion pathway protein E / Type II secretion cytoplasmic ATP binding protein (PulE, ATPase) low > 79
Shewanella loihica PV-4 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) 0.63 Shew_3618 general secretory pathway protein E (RefSeq) low > 60
Marinobacter adhaerens HP15 0.50 HP15_3708 4-aminobutyrate aminotransferase 0.58 HP15_1602 type II secretion system protein E low > 73
Lysobacter sp. OAE881 0.25 ABIE51_RS02780 aspartate aminotransferase family protein 0.38 ABIE51_RS04520 type II secretion system ATPase GspE low > 62

Not shown: 12 genomes with orthologs for ECD_02518 only; 31 genomes with orthologs for ECD_02837 only