Conservation of cofitness between ECD_03500 and ECD_02661 in Escherichia coli BL21

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03500 ribonuclease PH 1.0 ECD_02661 cysteine sulfinate desulfinase 0.54 9
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00059 Ribonuclease PH 1.00 OHPLBJKB_00921 Cysteine desulfurase CsdA 0.60 32
Escherichia coli ECRC62 1.00 BNILDI_04045 rph ribonuclease PH 1.00 BNILDI_10490 csdA cysteine desulfurase CsdA low > 75
Escherichia coli ECRC98 1.00 JDDGAC_19215 rph ribonuclease PH 0.99 JDDGAC_23770 csdA cysteine desulfurase CsdA low > 86
Escherichia coli ECRC100 1.00 OKFHMN_15590 rph ribonuclease PH 0.99 OKFHMN_20105 csdA cysteine desulfurase CsdA low > 80
Escherichia coli ECRC102 1.00 NIAGMN_13350 rph ribonuclease PH 0.99 NIAGMN_17875 csdA cysteine desulfurase CsdA — —
Escherichia coli ECOR27 1.00 NOLOHH_07470 rph ribonuclease PH 0.99 NOLOHH_11985 csdA cysteine desulfurase CsdA low > 75
Escherichia fergusonii Becca 1.00 EFB2_00170 Ribonuclease PH 0.98 EFB2_01107 Cysteine desulfurase CsdA low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS20755 ribonuclease PH 0.98 ECOLIN_RS15660 cysteine desulfurase CsdA low > 55
Escherichia coli ECRC99 1.00 KEDOAH_12555 rph ribonuclease PH 0.99 KEDOAH_08025 csdA cysteine desulfurase CsdA — —
Escherichia coli ECOR38 1.00 HEPCGN_14410 rph ribonuclease PH 0.99 HEPCGN_19360 csdA cysteine desulfurase CsdA low > 87
Escherichia coli ECRC101 1.00 MCAODC_06100 rph ribonuclease PH 0.99 MCAODC_10630 csdA cysteine desulfurase CsdA low > 87
Escherichia coli BW25113 0.93 b3643 rph ribonuclease PH (NCBI) 1.00 b2810 csdA cysteine sulfinate desulfinase (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF366 Ribonuclease PH (EC 2.7.7.56) 0.87 GFF4867 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 78
Klebsiella michiganensis M5al 0.92 BWI76_RS27390 ribonuclease PH 0.82 BWI76_RS22965 cysteine sulfinate desulfinase low > 92
Enterobacter sp. TBS_079 0.92 MPMX20_00092 Ribonuclease PH 0.85 MPMX20_03673 Cysteine desulfurase CsdA low > 85
Enterobacter asburiae PDN3 0.91 EX28DRAFT_3893 ribonuclease PH 0.86 EX28DRAFT_2886 cysteine desulfurase, catalytic subunit CsdA low > 76
Dickeya dadantii 3937 0.89 DDA3937_RS20540 ribonuclease PH 0.66 DDA3937_RS05040 cysteine desulfurase CsdA low > 74
Dickeya dianthicola 67-19 0.88 HGI48_RS00675 ribonuclease PH 0.66 HGI48_RS05045 cysteine desulfurase CsdA 0.62 20
Dickeya dianthicola ME23 0.88 DZA65_RS00730 ribonuclease PH 0.65 DZA65_RS05385 cysteine desulfurase CsdA low > 75
Serratia liquefaciens MT49 0.87 IAI46_24850 ribonuclease PH 0.71 IAI46_20350 cysteine desulfurase CsdA low > 86
Pantoea sp. MT58 0.87 IAI47_00595 ribonuclease PH 0.73 IAI47_04015 cysteine desulfurase CsdA low > 76
Erwinia tracheiphila SCR3 0.86 LU632_RS22020 rph ribonuclease PH 0.69 LU632_RS06240 csdA cysteine desulfurase CsdA low > 74
Pectobacterium carotovorum WPP14 0.85 HER17_RS20855 ribonuclease PH 0.70 HER17_RS16425 cysteine desulfurase CsdA low > 75
Rahnella sp. WP5 0.85 EX31_RS14505 ribonuclease PH 0.67 EX31_RS13120 cysteine desulfurase CsdA low > 89
Vibrio cholerae E7946 ATCC 55056 0.77 CSW01_01115 ribonuclease PH 0.48 CSW01_11740 cysteine desulfurase CsdA low > 62
Pseudomonas stutzeri RCH2 0.70 Psest_3813 ribonuclease PH 0.37 Psest_1464 Selenocysteine lyase low > 67
Pseudomonas syringae pv. syringae B728a ΔmexB 0.69 Psyr_0213 RNAse PH 0.37 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas syringae pv. syringae B728a 0.69 Psyr_0213 RNAse PH 0.37 Psyr_1335 Aminotransferase, class V low > 86
Pseudomonas putida KT2440 0.69 PP_5294 Ribonuclease PH 0.39 PP_1529 Probable cysteine desulfurase low > 96
Pseudomonas fluorescens FW300-N1B4 0.69 Pf1N1B4_2117 Ribonuclease PH (EC 2.7.7.56) 0.38 Pf1N1B4_3076 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 87
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_4365 Ribonuclease PH (EC 2.7.7.56) 0.36 Pf6N2E2_3079 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 103
Pseudomonas fluorescens FW300-N2C3 0.69 AO356_12500 ribonuclease PH 0.36 AO356_06075 cysteine sulfinate desulfinase 0.26 78
Pseudomonas fluorescens GW456-L13 0.69 PfGW456L13_784 Ribonuclease PH (EC 2.7.7.56) 0.38 PfGW456L13_4717 Cysteine desulfurase CsdA-CsdE (EC 2.8.1.7), main protein CsdA low > 87
Pseudomonas sp. RS175 0.68 PFR28_04420 Ribonuclease PH 0.36 PFR28_00389 Cysteine desulfurase SufS low > 88
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS29490 ribonuclease PH 0.38 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas fluorescens SBW25 0.68 PFLU_RS29490 ribonuclease PH 0.38 PFLU_RS06240 cysteine desulfurase low > 109
Pseudomonas simiae WCS417 0.68 PS417_27810 ribonuclease PH 0.37 PS417_06175 cysteine sulfinate desulfinase low > 88

Not shown: 51 genomes with orthologs for ECD_03500 only; 0 genomes with orthologs for ECD_02661 only