Conservation of cofitness between ECD_00111 and ECD_02591 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_00111 aromatic amino acid transporter 1.0 ECD_02591 RNA polymerase, sigma S (sigma 38) factor 0.69 14
Escherichia coli BW25113 1.00 b0112 aroP aromatic amino acid transporter (NCBI) 1.00 b2741 rpoS RNA polymerase sigma factor (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_03549 Aromatic amino acid transport protein AroP 1.00 OHPLBJKB_00992 RNA polymerase sigma factor RpoS low > 73
Escherichia coli ECRC62 1.00 BNILDI_08750 aroP aromatic amino acid transporter AroP 1.00 BNILDI_10860 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia coli ECOR38 1.00 HEPCGN_08495 aroP aromatic amino acid transporter AroP 1.00 HEPCGN_19675 rpoS RNA polymerase sigma factor RpoS low > 87
Escherichia coli ECOR27 1.00 NOLOHH_02860 aroP aromatic amino acid transporter AroP 1.00 NOLOHH_12310 rpoS RNA polymerase sigma factor RpoS low > 75
Escherichia fergusonii Becca 0.99 EFB2_03937 Aromatic amino acid transport protein AroP 1.00 EFB2_01169 RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC100 0.99 OKFHMN_10515 aroP aromatic amino acid transporter AroP 0.92 OKFHMN_20495 rpoS RNA polymerase sigma factor RpoS low > 80
Escherichia coli ECRC98 0.99 JDDGAC_14110 aroP aromatic amino acid transporter AroP 1.00 JDDGAC_24160 rpoS RNA polymerase sigma factor RpoS low > 86
Escherichia coli ECRC102 0.99 NIAGMN_08365 aroP aromatic amino acid transporter AroP 1.00 NIAGMN_18265 rpoS RNA polymerase sigma factor RpoS
Escherichia coli ECRC101 0.99 MCAODC_01030 aroP aromatic amino acid transporter AroP 1.00 MCAODC_11020 rpoS RNA polymerase sigma factor RpoS low > 87
Enterobacter asburiae PDN3 0.95 EX28DRAFT_3707 Gamma-aminobutyrate permease and related permeases 0.99 EX28DRAFT_2837 RNA polymerase, sigma 38 subunit, RpoS low > 76
Klebsiella michiganensis M5al 0.95 BWI76_RS04870 aromatic amino acid transporter AroP 0.99 BWI76_RS22645 RNA polymerase sigma factor RpoS low > 92
Enterobacter sp. TBS_079 0.94 MPMX20_00805 Aromatic amino acid transport protein AroP 0.99 MPMX20_03627 RNA polymerase sigma factor RpoS low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.93 GFF124 Aromatic amino acid transport protein AroP 0.99 GFF4788 RNA polymerase sigma factor RpoS low > 78
Rahnella sp. WP5 0.87 EX31_RS03490 aromatic amino acid transporter AroP 0.92 EX31_RS07825 RNA polymerase sigma factor RpoS low > 89
Pantoea sp. MT58 0.85 IAI47_15820 aromatic amino acid transporter AroP 0.95 IAI47_04235 RNA polymerase sigma factor RpoS low > 76
Erwinia tracheiphila SCR3 0.80 LU632_RS03070 aroP aromatic amino acid transporter AroP 0.94 LU632_RS06480 rpoS RNA polymerase sigma factor RpoS low > 74
Pectobacterium carotovorum WPP14 0.78 HER17_RS03280 amino acid permease 0.92 HER17_RS04350 RNA polymerase sigma factor RpoS low > 75
Serratia liquefaciens MT49 0.78 IAI46_21335 amino acid permease 0.95 IAI46_03790 RNA polymerase sigma factor RpoS low > 86
Dickeya dadantii 3937 0.76 DDA3937_RS17935 amino acid permease 0.93 DDA3937_RS16875 RNA polymerase sigma factor RpoS
Dickeya dianthicola 67-19 0.76 HGI48_RS17865 amino acid permease 0.93 HGI48_RS16945 RNA polymerase sigma factor RpoS low > 71
Dickeya dianthicola ME23 0.76 DZA65_RS19010 amino acid permease 0.94 DZA65_RS18020 RNA polymerase sigma factor RpoS low > 75
Paraburkholderia sabiae LMG 24235 0.72 QEN71_RS03190 amino acid permease 0.38 QEN71_RS22240 RNA polymerase sigma factor RpoS low > 153
Pseudomonas putida KT2440 0.70 PP_0927 aromatic amino acid transport protein 0.64 PP_1623 RNA polymerase, sigma S (sigma 38) factor low > 96
Pseudomonas fluorescens SBW25 0.68 PFLU_RS23870 amino acid permease 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Pseudomonas fluorescens SBW25-INTG 0.68 PFLU_RS23870 amino acid permease 0.64 PFLU_RS06430 RNA polymerase sigma factor RpoS low > 109
Paraburkholderia bryophila 376MFSha3.1 0.68 H281DRAFT_04042 phenylacetate transporter (from data) 0.38 H281DRAFT_00844 RNA polymerase, sigma 38 subunit, RpoS
Pseudomonas fluorescens FW300-N2C3 0.67 AO356_18530 L-tyrosine transporter (from data) 0.64 AO356_05885 RNA polymerase sigma factor RpoS low > 104
Pseudomonas simiae WCS417 0.67 PS417_22235 aromatic amino acid transporter 0.64 PS417_06365 RNA polymerase sigma factor low > 88
Pseudomonas fluorescens FW300-N2E3 0.67 AO353_18555 aromatic amino acid transporter 0.64 AO353_16615 RNA polymerase sigma factor RpoS low > 101
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4291 L-tryptophan transporter (from data) 0.64 PfGW456L13_4674 RNA polymerase sigma factor RpoS low > 87
Pseudomonas fluorescens FW300-N2E2 0.67 Pf6N2E2_5633 Aromatic amino acid transport protein AroP 0.64 Pf6N2E2_3037 RNA polymerase sigma factor RpoS low > 103
Pseudomonas fluorescens FW300-N1B4 0.67 Pf1N1B4_3559 Aromatic amino acid transport protein AroP 0.64 Pf1N1B4_3115 RNA polymerase sigma factor RpoS low > 87
Pseudomonas syringae pv. syringae B728a 0.66 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas sp. RS175 0.66 PFR28_03311 Aromatic amino acid transport protein AroP 0.64 PFR28_00427 RNA polymerase sigma factor RpoS low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.66 Psyr_3580 aromatic amino acid:proton symporter, AAT family 0.64 Psyr_1374 RNA polymerase, sigma 38 subunit, RpoS low > 86
Pseudomonas sp. S08-1 0.66 OH686_21130 Aromatic amino acid transport protein AroP 0.65 OH686_18185 RNA polymerase sigma factor RpoS low > 80
Pseudomonas stutzeri RCH2 0.66 Psest_1697 Gamma-aminobutyrate permease and related permeases 0.63 Psest_2806 RNA polymerase sigma factor RpoS low > 67

Not shown: 7 genomes with orthologs for ECD_00111 only; 16 genomes with orthologs for ECD_02591 only