Conservation of cofitness between ECD_03303 and ECD_02518 in Escherichia coli BL21

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03303 branched-chain amino acid ABC transporter ATPase 1.0 ECD_02518 4-aminobutyrate aminotransferase, PLP-dependent 0.64 8
Escherichia coli Nissle 1917 1.00 ECOLIN_RS19755 high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 ECOLIN_RS14845 4-aminobutyrate--2-oxoglutarate transaminase low > 55
Escherichia coli ECOR27 1.00 NOLOHH_08555 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 NOLOHH_12735 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 75
Escherichia coli ECRC99 1.00 KEDOAH_11380 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 KEDOAH_07230 gabT 4-aminobutyrate--2-oxoglutarate transaminase — —
Escherichia coli ECRC102 1.00 NIAGMN_14530 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 NIAGMN_18675 gabT 4-aminobutyrate--2-oxoglutarate transaminase — —
Escherichia coli ECRC98 1.00 JDDGAC_20390 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 JDDGAC_24570 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 86
Escherichia coli ECRC62 1.00 BNILDI_02950 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 BNILDI_11295 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 75
Escherichia coli ECRC100 1.00 OKFHMN_16760 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 OKFHMN_20910 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 80
Escherichia fergusonii Becca 1.00 EFB2_00368 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.99 EFB2_01268 4-aminobutyrate aminotransferase GabT low > 86
Escherichia coli ECRC101 1.00 MCAODC_07290 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.99 MCAODC_11430 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 87
Escherichia coli BW25113 1.00 b3454 livF ATP-binding component of leucine transport (VIMSS) 0.99 b2662 gabT 4-aminobutyrate aminotransferase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_15580 livF high-affinity branched-chain amino acid ABC transporter ATP-binding protein LivF 0.98 HEPCGN_20155 gabT 4-aminobutyrate--2-oxoglutarate transaminase low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_00249 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.99 OHPLBJKB_01070 4-aminobutyrate aminotransferase GabT low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF552 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.90 GFF1567 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 78
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_3849 L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_3849 L-isoleucine ABC transporter ATP-binding protein / L-leucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein 0.72 Psyr_0090 4-aminobutyrate aminotransferase apoenzyme low > 86
Marinobacter adhaerens HP15 0.67 HP15_3059 high-affinity branched-chain amino acid ABC transporter, ATP-binding protein 0.50 HP15_3708 4-aminobutyrate aminotransferase low > 73
Pseudomonas stutzeri RCH2 0.65 Psest_1308 ABC-type branched-chain amino acid transport systems, ATPase component 0.76 Psest_3653 4-aminobutyrate aminotransferase, prokaryotic type low > 67
Pseudomonas putida KT2440 0.64 PP_1137 high-affinity branched-chain amino acid transporter, ATP binding 0.73 PP_0214 4-aminobutyrate aminotransferase low > 96
Pseudomonas fluorescens FW300-N2C3 0.64 AO356_05340 ABC transporter ATP-binding protein 0.73 AO356_10715 4-aminobutyrate aminotransferase low > 104
Pseudomonas sp. RS175 0.64 PFR28_00536 High-affinity branched-chain amino acid transport ATP-binding protein LivF 0.74 PFR28_04756 5-aminovalerate aminotransferase DavT low > 88
Pseudomonas fluorescens SBW25 0.64 PFLU_RS06625 ABC transporter ATP-binding protein 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase low > 109
Pseudomonas simiae WCS417 0.64 PS417_06595 ABC transporter ATP-binding protein 0.73 PS417_00900 4-aminobutyrate aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.64 PFLU_RS06625 ABC transporter ATP-binding protein 0.73 PFLU_RS00915 4-aminobutyrate--2-oxoglutarate transaminase low > 109
Pseudomonas fluorescens GW456-L13 0.64 PfGW456L13_4611 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.73 PfGW456L13_494 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 87
Pseudomonas sp. S08-1 0.64 OH686_04625 Branched-chain amino acid ABC transporter, ATP-binding protein LivF 0.77 OH686_11880 4-aminobutyrate transaminase low > 80
Pseudomonas fluorescens FW300-N2E3 0.63 AO353_17105 ABC transporter ATP-binding protein 0.73 AO353_11510 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 101
Pseudomonas fluorescens FW300-N2E2 0.63 Pf6N2E2_2926 ABC transporter for L-leucine/L-isoleucine/L-phenylalanine/D-alanine, ATPase component 2 LivF (from data) 0.73 Pf6N2E2_4013 5-aminovalerate transaminase (EC 2.6.1.48) (from data) low > 103
Pseudomonas fluorescens FW300-N1B4 0.63 Pf1N1B4_3214 Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) 0.73 Pf1N1B4_1733 5-aminovalerate aminotransferase (EC 2.6.1.48) / Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 87
Rhodopseudomonas palustris CGA009 0.54 TX73_019725 ABC transporter ATP-binding protein 0.50 TX73_012015 4-aminobutyrate--2-oxoglutarate transaminase low > 86
Variovorax sp. OAS795 0.53 ABID97_RS27565 ABC transporter ATP-binding protein 0.64 ABID97_RS21585 4-aminobutyrate--2-oxoglutarate transaminase low > 91
Acidovorax sp. GW101-3H11 0.46 Ac3H11_1692 ABC transporter for glutamine/isoleucine/leucine/phenylalanine/proline/serine/tyrosine, ATPase component 2 (from data) 0.62 Ac3H11_4179 Gamma-aminobutyrate:alpha-ketoglutarate aminotransferase (EC 2.6.1.19) low > 79
Shewanella loihica PV-4 0.41 Shew_2606 ABC transporter-related protein (RefSeq) 0.51 Shew_3172 4-aminobutyrate aminotransferase (RefSeq) low > 60

Not shown: 40 genomes with orthologs for ECD_03303 only; 4 genomes with orthologs for ECD_02518 only