Conservation of cofitness between ECD_03013 and ECD_02494 in Escherichia coli BL21

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_03013 16S rRNA C1402 2'-O-ribose methyltransferase, SAM-dependent 1.0 ECD_02494 OM lipoprotein putative positive effector of YfiN activity 0.73 14
Escherichia coli ECOR38 1.00 HEPCGN_17110 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.98 HEPCGN_20315 yfiB OmpA family protein low > 85
Escherichia coli ECRC99 1.00 KEDOAH_09915 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1.00 KEDOAH_07025 yfiB OmpA family protein — —
Escherichia coli BW25113 1.00 b3146 yraL predicted methyltransferase (NCBI) 1.00 b2605 yfiB predicted outer membrane lipoprotein (NCBI) low > 76
Escherichia coli ECRC102 1.00 NIAGMN_15995 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.99 NIAGMN_18965 yfiB OmpA family protein — —
Escherichia coli ECRC101 1.00 OKFHMN_18235 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.99 OKFHMN_21195 yfiB OmpA family protein — —
Escherichia coli ECRC98 1.00 JDDGAC_21860 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1.00 JDDGAC_24860 yfiB OmpA family protein — —
Escherichia coli ECRC101 1.00 MCAODC_08755 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.99 MCAODC_11725 yfiB OmpA family protein — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00555 Ribosomal RNA small subunit methyltransferase I 1.00 OHPLBJKB_01101 hypothetical protein low > 73
Escherichia fergusonii Becca 1.00 EFB2_00677 Ribosomal RNA small subunit methyltransferase I 0.99 EFB2_01287 Peptidoglycan-associated lipoprotein low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS18085 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.99 ECOLIN_RS14725 OmpA family protein — —
Escherichia coli ECOR27 0.99 NOLOHH_10035 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1.00 NOLOHH_12870 yfiB OmpA family protein low > 57
Escherichia coli ECRC62 0.99 BNILDI_01495 rsmI 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 1.00 BNILDI_11675 yfiB OmpA family protein — —
Enterobacter sp. TBS_079 0.89 MPMX20_04050 Ribosomal RNA small subunit methyltransferase I 0.77 MPMX20_03473 Peptidoglycan-associated lipoprotein low > 85
Enterobacter asburiae PDN3 0.89 EX28DRAFT_3195 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.77 EX28DRAFT_2706 Outer membrane protein and related peptidoglycan-associated (lipo)proteins low > 76
Klebsiella michiganensis M5al 0.88 BWI76_RS24910 rRNA (cytidine-2'-O-)-methyltransferase 0.75 BWI76_RS21495 outer membrane lipoprotein low > 92
Rahnella sp. WP5 0.79 EX31_RS12550 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.45 EX31_RS04235 OmpA family protein low > 89
Pantoea sp. MT58 0.77 IAI47_02850 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.55 IAI47_20470 OmpA family protein low > 76
Serratia liquefaciens MT49 0.77 IAI46_22295 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.51 IAI46_02970 OmpA family protein low > 86
Pseudomonas fluorescens FW300-N2E2 0.57 Pf6N2E2_5346 rRNA small subunit methyltransferase I 0.34 Pf6N2E2_3455 Integral membrane protein YfiB low > 103
Pseudomonas fluorescens FW300-N2C3 0.57 AO356_17110 methyltransferase 0.32 AO356_07895 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E3 0.56 AO353_15290 methyltransferase 0.34 AO353_06005 hypothetical protein low > 101
Pseudomonas sp. RS175 0.56 PFR28_03597 Ribosomal RNA small subunit methyltransferase I 0.34 PFR28_00011 Peptidoglycan-associated lipoprotein low > 88
Pseudomonas simiae WCS417 0.56 PS417_04590 methyltransferase 0.32 PS417_23755 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.56 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.33 PFLU_RS25570 OmpA family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS04655 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.33 PFLU_RS25570 OmpA family protein low > 109
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_953 rRNA small subunit methyltransferase I 0.35 Pf1N1B4_1231 Integral membrane protein YfiB — —
Pseudomonas putida KT2440 0.55 PP_1326 16S rRNA 2'-O-ribose C1402 methyltransferase 0.34 PP_4669 OmpA family protein low > 96
Cupriavidus basilensis FW507-4G11 0.39 RR42_RS19740 16S rRNA methyltransferase 0.36 RR42_RS22845 cell envelope biogenesis protein OmpA low > 128
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_2755 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 0.32 Ga0059261_3399 Outer membrane protein and related peptidoglycan-associated (lipo)proteins — —

Not shown: 60 genomes with orthologs for ECD_03013 only; 0 genomes with orthologs for ECD_02494 only