Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli BL21 | 1.0 | ECD_02979 | | L-serine dehydratase 3, anaerobic | 1.0 | ECD_02393 | | polyphosphate kinase, component of RNA degradosome | low | > 61 |
Escherichia coli BW25113 | 1.00 | b4471 | tdcG | L-serine dehydratase 3 (NCBI) | 1.00 | b2501 | ppk | polyphosphate kinase (NCBI) | low | > 76 |
Escherichia coli ECOR38 | 1.00 | HEPCGN_17260 | tdcG | L-serine ammonia-lyase | 1.00 | HEPCGN_20965 | ppk1 | polyphosphate kinase 1 | low | > 87 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_00588 | | L-serine dehydratase TdcG | 1.00 | OHPLBJKB_01225 | | Polyphosphate kinase | 0.47 | 49 |
Escherichia coli ECRC62 | 1.00 | BNILDI_01320 | tdcG | L-serine ammonia-lyase | 1.00 | BNILDI_12260 | ppk1 | polyphosphate kinase 1 | low | > 75 |
Escherichia coli ECOR27 | 1.00 | NOLOHH_10205 | tdcG | L-serine ammonia-lyase | 1.00 | NOLOHH_13450 | ppk1 | polyphosphate kinase 1 | low | > 75 |
Escherichia coli ECRC98 | 0.99 | JDDGAC_22060 | tdcG | L-serine ammonia-lyase | 1.00 | JDDGAC_25745 | ppk1 | polyphosphate kinase 1 | low | > 86 |
Escherichia fergusonii Becca | 0.99 | EFB2_00702 | | L-serine dehydratase TdcG | 1.00 | EFB2_01397 | | Polyphosphate kinase | low | > 86 |
Escherichia coli ECRC101 | 0.99 | MCAODC_08940 | tdcG | L-serine ammonia-lyase | 1.00 | MCAODC_12330 | ppk1 | polyphosphate kinase 1 | low | > 87 |
Escherichia coli ECRC99 | 0.99 | KEDOAH_09720 | tdcG | L-serine ammonia-lyase | 1.00 | KEDOAH_06420 | ppk1 | polyphosphate kinase 1 | — | — |
Escherichia coli ECRC100 | 0.99 | OKFHMN_18425 | tdcG | L-serine ammonia-lyase | 1.00 | OKFHMN_21800 | ppk1 | polyphosphate kinase 1 | low | > 80 |
Escherichia coli ECRC102 | 0.99 | NIAGMN_16190 | tdcG | L-serine ammonia-lyase | 1.00 | NIAGMN_19570 | ppk1 | polyphosphate kinase 1 | — | — |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS17915 | | L-serine ammonia-lyase | 1.00 | ECOLIN_RS14200 | | polyphosphate kinase 1 | low | > 55 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.87 | GFF3206 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.94 | GFF2167 | | Polyphosphate kinase (EC 2.7.4.1) | low | > 78 |
Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_1339 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.28 | B158DRAFT_2312 | | polyphosphate kinase 1 | low | > 40 |
Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.1601.1 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.26 | Xcc-8004.4064.1 | | Polyphosphate kinase (EC 2.7.4.1) | low | > 74 |
Dyella japonica UNC79MFTsu3.2 | 0.52 | ABZR86_RS19060 | | L-serine ammonia-lyase | 0.28 | ABZR86_RS07490 | | polyphosphate kinase 1 | 0.39 | 48 |
Rhodanobacter denitrificans MT42 | 0.52 | LRK55_RS05035 | | L-serine ammonia-lyase | 0.29 | LRK55_RS15755 | | polyphosphate kinase 1 | low | > 63 |
Rhodanobacter denitrificans FW104-10B01 | 0.52 | LRK54_RS05255 | | L-serine ammonia-lyase | 0.29 | LRK54_RS16000 | | polyphosphate kinase 1 | low | > 59 |
Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_01565 | sdaA | L-serine ammonia-lyase | 0.28 | OKGIIK_08995 | ppk1 | RNA degradosome polyphosphate kinase | low | > 52 |
Pseudomonas fluorescens FW300-N2E3 | 0.51 | AO353_03505 | | serine dehydratase | 0.29 | AO353_08885 | | polyphosphate kinase | low | > 101 |
Pseudomonas stutzeri RCH2 | 0.51 | Psest_0784 | | L-serine dehydratase, iron-sulfur-dependent, single chain form | 0.29 | Psest_3732 | | polyphosphate kinase 1 | low | > 67 |
Lysobacter sp. OAE881 | 0.51 | ABIE51_RS16145 | | L-serine ammonia-lyase | 0.26 | ABIE51_RS14230 | | polyphosphate kinase 1 | low | > 62 |
Pseudomonas putida KT2440 | 0.50 | PP_0987 | | L-serine dehydratase | 0.29 | PP_5217 | | Polyphosphate kinase | low | > 96 |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | 0.29 | Psyr_0293 | | Polyphosphate kinase | low | > 86 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3522 | | L-serine ammonia-lyase | 0.29 | Psyr_0293 | | Polyphosphate kinase | low | > 86 |
Variovorax sp. SCN45 | 0.46 | GFF3439 | | L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) | 0.25 | GFF1089 | | Polyphosphate kinase (EC 2.7.4.1) | low | > 127 |
Azospirillum sp. SherDot2 | 0.41 | MPMX19_04703 | | L-serine dehydratase TdcG | 0.27 | MPMX19_01149 | | Polyphosphate kinase | low | > 112 |
Bacteroides thetaiotaomicron VPI-5482 | 0.31 | BT4678 | | L-serine dehydratase (NCBI ptt file) | 0.37 | BT0541 | | Polyphosphate kinase (NCBI ptt file) | low | > 81 |
Phocaeicola dorei CL03T12C01 | 0.30 | ABI39_RS12245 | | L-serine ammonia-lyase | 0.36 | ABI39_RS14955 | | RNA degradosome polyphosphate kinase | low | > 72 |
Phocaeicola vulgatus CL09T03C04 | 0.30 | HMPREF1058_RS16410 | | L-serine ammonia-lyase | 0.32 | HMPREF1058_RS02340 | | RNA degradosome polyphosphate kinase | low | > 67 |
Bacteroides ovatus ATCC 8483 | 0.30 | BACOVA_05536 | | L-serine ammonia-lyase | 0.37 | BACOVA_03769 | | polyphosphate kinase 1 | low | > 94 |
Bacteroides stercoris CC31F | 0.30 | HMPREF1181_RS11755 | | L-serine ammonia-lyase | 0.32 | HMPREF1181_RS08035 | | RNA degradosome polyphosphate kinase | low | > 56 |
Parabacteroides merdae CL09T00C40 | 0.29 | HMPREF1078_RS01410 | | L-serine ammonia-lyase | 0.34 | HMPREF1078_RS16770 | | RNA degradosome polyphosphate kinase | low | > 61 |
Not shown: 1 genomes with orthologs for ECD_02979 only; 63 genomes with orthologs for ECD_02393 only