Conservation of cofitness between ECD_02979 and ECD_02393 in Escherichia coli BL21

33 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02979 L-serine dehydratase 3, anaerobic 1.0 ECD_02393 polyphosphate kinase, component of RNA degradosome low > 61
Escherichia coli BW25113 1.00 b4471 tdcG L-serine dehydratase 3 (NCBI) 1.00 b2501 ppk polyphosphate kinase (NCBI) low > 76
Escherichia coli ECOR38 1.00 HEPCGN_17260 tdcG L-serine ammonia-lyase 1.00 HEPCGN_20965 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00588 L-serine dehydratase TdcG 1.00 OHPLBJKB_01225 Polyphosphate kinase 0.47 49
Escherichia coli ECRC62 1.00 BNILDI_01320 tdcG L-serine ammonia-lyase 1.00 BNILDI_12260 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli ECOR27 1.00 NOLOHH_10205 tdcG L-serine ammonia-lyase 1.00 NOLOHH_13450 ppk1 polyphosphate kinase 1 low > 75
Escherichia coli ECRC98 0.99 JDDGAC_22060 tdcG L-serine ammonia-lyase 1.00 JDDGAC_25745 ppk1 polyphosphate kinase 1 low > 86
Escherichia fergusonii Becca 0.99 EFB2_00702 L-serine dehydratase TdcG 1.00 EFB2_01397 Polyphosphate kinase low > 86
Escherichia coli ECRC101 0.99 MCAODC_08940 tdcG L-serine ammonia-lyase 1.00 MCAODC_12330 ppk1 polyphosphate kinase 1 low > 87
Escherichia coli ECRC99 0.99 KEDOAH_09720 tdcG L-serine ammonia-lyase 1.00 KEDOAH_06420 ppk1 polyphosphate kinase 1
Escherichia coli ECRC100 0.99 OKFHMN_18425 tdcG L-serine ammonia-lyase 1.00 OKFHMN_21800 ppk1 polyphosphate kinase 1 low > 80
Escherichia coli ECRC102 0.99 NIAGMN_16190 tdcG L-serine ammonia-lyase 1.00 NIAGMN_19570 ppk1 polyphosphate kinase 1
Escherichia coli Nissle 1917 0.99 ECOLIN_RS17915 L-serine ammonia-lyase 1.00 ECOLIN_RS14200 polyphosphate kinase 1 low > 55
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF3206 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.94 GFF2167 Polyphosphate kinase (EC 2.7.4.1) low > 78
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_1339 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.28 B158DRAFT_2312 polyphosphate kinase 1 low > 40
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1601.1 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.26 Xcc-8004.4064.1 Polyphosphate kinase (EC 2.7.4.1) low > 74
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS19060 L-serine ammonia-lyase 0.28 ABZR86_RS07490 polyphosphate kinase 1 0.39 48
Rhodanobacter denitrificans MT42 0.52 LRK55_RS05035 L-serine ammonia-lyase 0.29 LRK55_RS15755 polyphosphate kinase 1 low > 63
Rhodanobacter denitrificans FW104-10B01 0.52 LRK54_RS05255 L-serine ammonia-lyase 0.29 LRK54_RS16000 polyphosphate kinase 1 low > 59
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_01565 sdaA L-serine ammonia-lyase 0.28 OKGIIK_08995 ppk1 RNA degradosome polyphosphate kinase low > 52
Pseudomonas fluorescens FW300-N2E3 0.51 AO353_03505 serine dehydratase 0.29 AO353_08885 polyphosphate kinase low > 101
Pseudomonas stutzeri RCH2 0.51 Psest_0784 L-serine dehydratase, iron-sulfur-dependent, single chain form 0.29 Psest_3732 polyphosphate kinase 1 low > 67
Lysobacter sp. OAE881 0.51 ABIE51_RS16145 L-serine ammonia-lyase 0.26 ABIE51_RS14230 polyphosphate kinase 1 low > 62
Pseudomonas putida KT2440 0.50 PP_0987 L-serine dehydratase 0.29 PP_5217 Polyphosphate kinase low > 96
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3522 L-serine ammonia-lyase 0.29 Psyr_0293 Polyphosphate kinase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3522 L-serine ammonia-lyase 0.29 Psyr_0293 Polyphosphate kinase low > 86
Variovorax sp. SCN45 0.46 GFF3439 L-serine dehydratase, beta subunit (EC 4.3.1.17) / L-serine dehydratase, alpha subunit (EC 4.3.1.17) 0.25 GFF1089 Polyphosphate kinase (EC 2.7.4.1) low > 127
Azospirillum sp. SherDot2 0.41 MPMX19_04703 L-serine dehydratase TdcG 0.27 MPMX19_01149 Polyphosphate kinase low > 112
Bacteroides thetaiotaomicron VPI-5482 0.31 BT4678 L-serine dehydratase (NCBI ptt file) 0.37 BT0541 Polyphosphate kinase (NCBI ptt file) low > 81
Phocaeicola dorei CL03T12C01 0.30 ABI39_RS12245 L-serine ammonia-lyase 0.36 ABI39_RS14955 RNA degradosome polyphosphate kinase low > 72
Phocaeicola vulgatus CL09T03C04 0.30 HMPREF1058_RS16410 L-serine ammonia-lyase 0.32 HMPREF1058_RS02340 RNA degradosome polyphosphate kinase low > 67
Bacteroides ovatus ATCC 8483 0.30 BACOVA_05536 L-serine ammonia-lyase 0.37 BACOVA_03769 polyphosphate kinase 1 low > 94
Bacteroides stercoris CC31F 0.30 HMPREF1181_RS11755 L-serine ammonia-lyase 0.32 HMPREF1181_RS08035 RNA degradosome polyphosphate kinase low > 56
Parabacteroides merdae CL09T00C40 0.29 HMPREF1078_RS01410 L-serine ammonia-lyase 0.34 HMPREF1078_RS16770 RNA degradosome polyphosphate kinase low > 61

Not shown: 1 genomes with orthologs for ECD_02979 only; 63 genomes with orthologs for ECD_02393 only