Conservation of cofitness between ECD_01126 and ECD_01928 in Escherichia coli BL21

34 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01126 50S ribosomal protein L16 arginine hydroxylase; 2-oxoglutarate oxygenase 1.0 ECD_01928 phosphoribosyl-AMP cyclohydrolase and phosphoribosyl-ATP pyrophosphatase 0.46 11
Escherichia coli ECOR27 1.00 NOLOHH_20925 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.92 NOLOHH_15800 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 57
Escherichia coli ECOR38 1.00 HEPCGN_24085 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 HEPCGN_03190 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 85
Escherichia coli Nissle 1917 1.00 ECOLIN_RS06500 [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 ECOLIN_RS11975 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02540 50S ribosomal protein L16 3-hydroxylase 0.96 OHPLBJKB_01674 Histidine biosynthesis bifunctional protein HisIE low > 73
Escherichia fergusonii Becca 1.00 EFB2_02847 50S ribosomal protein L16 3-hydroxylase 0.98 EFB2_01830 Histidine biosynthesis bifunctional protein HisIE low > 86
Escherichia coli ECRC102 1.00 NIAGMN_24760 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 NIAGMN_22430 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli ECRC101 1.00 MCAODC_22450 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 MCAODC_20455 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli ECRC101 1.00 OKFHMN_00635 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 OKFHMN_24485 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli ECRC99 1.00 KEDOAH_24720 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 KEDOAH_03665 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli ECRC62 1.00 BNILDI_19090 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.98 BNILDI_14710 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli ECRC98 1.00 JDDGAC_06730 roxA [50S ribosomal protein L16]-arginine 3-hydroxylase 0.99 JDDGAC_28595 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE — —
Escherichia coli BW25113 1.00 b1128 ycfD orf, hypothetical protein (VIMSS) 1.00 b2026 hisI bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (NCBI) low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3413 FIG002776: hypothetical protein 0.89 GFF3906 Phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) / Phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) low > 78
Enterobacter asburiae PDN3 0.89 EX28DRAFT_1802 Uncharacterized conserved protein 0.91 EX28DRAFT_0533 phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19)/phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) low > 76
Enterobacter sp. TBS_079 0.89 MPMX20_01809 50S ribosomal protein L16 3-hydroxylase 0.91 MPMX20_03008 Histidine biosynthesis bifunctional protein HisIE low > 85
Klebsiella michiganensis M5al 0.88 BWI76_RS11270 50S ribosomal protein L16 arginine hydroxylase 0.87 BWI76_RS18955 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase — —
Erwinia tracheiphila SCR3 0.82 LU632_RS14600 cupin domain-containing protein 0.76 LU632_RS08915 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 74
Serratia liquefaciens MT49 0.81 IAI46_10385 cupin domain-containing protein 0.76 IAI46_08180 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 86
Dickeya dianthicola 67-19 0.80 HGI48_RS11555 cupin domain-containing protein 0.80 HGI48_RS09715 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS11890 cupin domain-containing protein 0.80 DZA65_RS10025 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 75
Pectobacterium carotovorum WPP14 0.80 HER17_RS11650 cupin domain-containing protein 0.70 HER17_RS12260 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 75
Dickeya dadantii 3937 0.80 DDA3937_RS11510 cupin domain-containing protein 0.81 DDA3937_RS09705 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 74
Rahnella sp. WP5 0.79 EX31_RS24550 cupin domain-containing protein 0.76 EX31_RS11470 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 89
Pantoea sp. MT58 0.79 IAI47_11940 cupin domain-containing protein 0.81 IAI47_07060 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 76
Shewanella oneidensis MR-1 0.42 SO2636 conserved hypothetical protein (NCBI ptt file) 0.62 SO2067 hisI phosphoribosyl-ATP pyrophosphatase/phosphoribosyl-AMP cyclohydrolase (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.42 Shewana3_1744 cupin 4 family protein (RefSeq) 0.60 Shewana3_1847 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) low > 73
Shewanella loihica PV-4 0.40 Shew_1557 cupin 4 family protein (RefSeq) 0.57 Shew_2204 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) low > 60
Shewanella amazonensis SB2B 0.37 Sama_2065 cupin 4 (RefSeq) 0.61 Sama_1948 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein (RefSeq) low > 62
Alteromonas macleodii MIT1002 0.34 MIT1002_01824 50S ribosomal protein L16 arginine hydroxylase 0.63 MIT1002_02639 Phosphoribosyl-ATP pyrophosphatase low > 70
Rhodanobacter sp. FW510-T8 0.30 OKGIIK_05950 roxA transcription factor 0.55 OKGIIK_04980 hisIE bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 52
Rhodanobacter denitrificans FW104-10B01 0.29 LRK54_RS00940 cupin domain-containing protein 0.55 LRK54_RS01575 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 59
Rhodanobacter denitrificans MT42 0.29 LRK55_RS00715 cupin domain-containing protein 0.56 LRK55_RS01355 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 63
Dyella japonica UNC79MFTsu3.2 0.29 ABZR86_RS05910 cupin domain-containing protein 0.54 ABZR86_RS06700 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase HisIE low > 74
Acinetobacter radioresistens SK82 0.22 MPMX26_01736 putative ribosomal oxygenase 0.31 MPMX26_00264 Histidine biosynthesis bifunctional protein HisIE low > 36

Not shown: 28 genomes with orthologs for ECD_01126 only; 15 genomes with orthologs for ECD_01928 only