Conservation of cofitness between ECD_01018 and ECD_00415 in Escherichia coli BL21

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_01018 proline:sodium symporter 1.0 ECD_00415 transcriptional repressor 0.40 21
Escherichia coli ECRC62 1.00 BNILDI_19660 putP sodium/proline symporter PutP 1.00 BNILDI_22545 acrR multidrug efflux transporter transcriptional repressor AcrR low > 75
Escherichia coli ECOR38 1.00 HEPCGN_23540 putP sodium/proline symporter PutP 1.00 HEPCGN_06810 acrR multidrug efflux transporter transcriptional repressor AcrR low > 87
Escherichia coli ECRC102 1.00 NIAGMN_23740 putP sodium/proline symporter PutP 0.99 NIAGMN_06250 acrR multidrug efflux transporter transcriptional repressor AcrR — —
Escherichia coli ECOR27 1.00 NOLOHH_21495 putP sodium/proline symporter PutP 1.00 NOLOHH_01130 acrR multidrug efflux transporter transcriptional repressor AcrR low > 75
Escherichia coli ECRC101 1.00 MCAODC_23980 putP sodium/proline symporter PutP 1.00 MCAODC_27420 acrR multidrug efflux transporter transcriptional repressor AcrR low > 87
Escherichia coli ECRC100 1.00 OKFHMN_04595 putP sodium/proline symporter PutP 0.99 OKFHMN_08195 acrR multidrug efflux transporter transcriptional repressor AcrR low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02651 Sodium/proline symporter 1.00 OHPLBJKB_03210 HTH-type transcriptional regulator AcrR low > 73
Escherichia coli ECRC99 1.00 KEDOAH_23150 putP sodium/proline symporter PutP 1.00 KEDOAH_19770 acrR multidrug efflux transporter transcriptional repressor AcrR — —
Escherichia coli ECRC98 1.00 JDDGAC_08205 putP sodium/proline symporter PutP 1.00 JDDGAC_11845 acrR multidrug efflux transporter transcriptional repressor AcrR low > 86
Escherichia coli BW25113 1.00 b1015 putP proline:sodium symporter (NCBI) 1.00 b0464 acrR DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia fergusonii Becca 1.00 EFB2_03065 Sodium/proline symporter 1.00 EFB2_03594 HTH-type transcriptional regulator AcrR low > 86
Escherichia coli Nissle 1917 1.00 ECOLIN_RS05300 sodium/proline symporter PutP 1.00 ECOLIN_RS02760 multidrug efflux transporter transcriptional repressor AcrR low > 55
Klebsiella michiganensis M5al 0.96 BWI76_RS10800 sodium:proline symporter 0.80 BWI76_RS06785 DNA-binding transcriptional repressor AcrR low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.94 GFF3303 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.88 GFF4381 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 78
Enterobacter asburiae PDN3 0.93 EX28DRAFT_1910 sodium/proline symporter 0.83 EX28DRAFT_2494 transcriptional regulator, TetR family low > 76
Enterobacter sp. TBS_079 0.92 MPMX20_01703 Sodium/proline symporter 0.72 MPMX20_01066 HTH-type transcriptional regulator AcrR low > 85
Pantoea sp. MT58 0.84 IAI47_08205 sodium/proline symporter PutP 0.60 IAI47_14505 multidrug efflux transporter transcriptional repressor AcrR low > 76
Serratia liquefaciens MT49 0.81 IAI46_15740 sodium/proline symporter PutP 0.66 IAI46_05195 multidrug efflux transporter transcriptional repressor AcrR low > 86
Dickeya dianthicola 67-19 0.80 HGI48_RS20260 sodium/proline symporter PutP 0.58 HGI48_RS05800 multidrug efflux transporter transcriptional repressor AcrR low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS21305 sodium/proline symporter PutP 0.59 DZA65_RS06125 multidrug efflux transporter transcriptional repressor AcrR low > 75
Rahnella sp. WP5 0.80 EX31_RS09415 sodium/proline symporter PutP 0.59 EX31_RS22480 multidrug efflux transporter transcriptional repressor AcrR low > 89
Dickeya dadantii 3937 0.80 DDA3937_RS20120 sodium/proline symporter PutP 0.59 DDA3937_RS05745 multidrug efflux transporter transcriptional repressor AcrR low > 74
Erwinia tracheiphila SCR3 0.80 LU632_RS13735 putP sodium/proline symporter PutP 0.59 LU632_RS18175 acrR multidrug efflux transporter transcriptional repressor AcrR 0.49 18
Pectobacterium carotovorum WPP14 0.79 HER17_RS01105 sodium/proline symporter PutP 0.59 HER17_RS15730 multidrug efflux transporter transcriptional repressor AcrR low > 75
Pseudomonas putida KT2440 0.76 PP_4946 sodium/L-proline transporter 0.35 PP_1387 Probable HTH-type transcriptional regulator TtgR low > 96
Pseudomonas fluorescens GW456-L13 0.76 PfGW456L13_221 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.36 PfGW456L13_4579 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 87
Pseudomonas simiae WCS417 0.76 PS417_02180 proline:sodium symporter PutP 0.38 PS417_06780 TetR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25-INTG 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.39 PFLU_RS06815 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25 0.75 PFLU_RS02235 sodium/proline symporter PutP 0.39 PFLU_RS06815 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens FW300-N1B4 0.75 Pf1N1B4_1487 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.39 Pf1N1B4_3248 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 87
Pseudomonas sp. S08-1 0.74 OH686_03775 sodium/proline symporter 0.38 OH686_16040 Transcriptional regulator, AcrR family low > 80
Pseudomonas syringae pv. syringae B728a 0.74 Psyr_0507 Na+/solute symporter 0.37 Psyr_4006 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.74 Psyr_0507 Na+/solute symporter 0.37 Psyr_4006 transcriptional regulator, TetR family low > 86
Pseudomonas fluorescens FW300-N2E3 0.73 AO353_12815 proline:sodium symporter PutP 0.39 AO353_17305 TetR family transcriptional regulator low > 101
Pseudomonas fluorescens FW300-N2C3 0.73 AO356_09010 proline:sodium symporter PutP 0.38 AO356_04870 TetR family transcriptional regulator low > 104
Pseudomonas fluorescens FW300-N2E2 0.73 Pf6N2E2_3684 Proline/sodium symporter PutP (TC 2.A.21.2.1) @ Propionate/sodium symporter 0.37 Pf6N2E2_2822 Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family low > 103
Pseudomonas sp. RS175 0.73 PFR28_05054 Sodium/proline symporter 0.38 PFR28_00633 HTH-type transcriptional regulator TtgR low > 88
Marinobacter adhaerens HP15 0.39 HP15_2205 sodium/solute symporter 0.22 HP15_3151 transcriptional regulator, TetR family low > 73

Not shown: 12 genomes with orthologs for ECD_01018 only; 19 genomes with orthologs for ECD_00415 only