Conservation of cofitness between ECD_02413 and ECD_00002 in Escherichia coli BL21

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli BL21 1.0 ECD_02413 3-mercaptopyruvate sulfurtransferase 1.0 ECD_00002 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 61
Escherichia coli ECRC62 1.00 BNILDI_12140 sseA 3-mercaptopyruvate sulfurtransferase 1.00 BNILDI_08160 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli ECOR27 1.00 NOLOHH_13340 sseA 3-mercaptopyruvate sulfurtransferase 1.00 NOLOHH_03440 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Escherichia coli BW25113 1.00 b2521 sseA putative thiosulfate sulfurtransferase (VIMSS) 1.00 b0002 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (NCBI) low > 76
Escherichia coli ECRC98 1.00 JDDGAC_25345 sseA 3-mercaptopyruvate sulfurtransferase 1.00 JDDGAC_14705 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 86
Escherichia coli ECRC99 1.00 KEDOAH_06550 sseA 3-mercaptopyruvate sulfurtransferase 1.00 KEDOAH_17045 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECRC101 1.00 MCAODC_12200 sseA 3-mercaptopyruvate sulfurtransferase 1.00 MCAODC_01625 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01188 3-mercaptopyruvate sulfurtransferase 1.00 OHPLBJKB_03658 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 73
Escherichia coli ECRC102 1.00 NIAGMN_19440 sseA 3-mercaptopyruvate sulfurtransferase 1.00 NIAGMN_08960 thrA bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia coli ECRC100 1.00 OKFHMN_21670 sseA 3-mercaptopyruvate sulfurtransferase 1.00 OKFHMN_11110 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 80
Escherichia coli Nissle 1917 1.00 ECOLIN_RS14320 3-mercaptopyruvate sulfurtransferase 0.99 ECOLIN_RS00010 bifunctional aspartate kinase/homoserine dehydrogenase I — —
Escherichia fergusonii Becca 0.99 EFB2_01369 3-mercaptopyruvate sulfurtransferase 1.00 EFB2_04041 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 86
Escherichia coli ECOR38 0.99 HEPCGN_20810 sseA 3-mercaptopyruvate sulfurtransferase 1.00 HEPCGN_09115 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF2422 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.93 GFF1078 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) 0.35 78
Klebsiella michiganensis M5al 0.78 BWI76_RS21115 3-mercaptopyruvate sulfurtransferase 0.92 BWI76_RS04245 bifunctional aspartate kinase/homoserine dehydrogenase I low > 92
Enterobacter sp. TBS_079 0.77 MPMX20_03401 3-mercaptopyruvate sulfurtransferase 0.90 MPMX20_00710 Bifunctional aspartokinase/homoserine dehydrogenase 1 low > 85
Enterobacter asburiae PDN3 0.76 EX28DRAFT_0120 Rhodanese-related sulfurtransferase 0.90 EX28DRAFT_3614 aspartate kinase (EC 2.7.2.4) low > 76
Erwinia tracheiphila SCR3 0.66 LU632_RS17855 sseA 3-mercaptopyruvate sulfurtransferase 0.82 LU632_RS02610 thrA bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Pantoea sp. MT58 0.63 IAI47_05020 3-mercaptopyruvate sulfurtransferase 0.83 IAI47_16215 bifunctional aspartate kinase/homoserine dehydrogenase I low > 76
Pectobacterium carotovorum WPP14 0.60 HER17_RS06065 3-mercaptopyruvate sulfurtransferase 0.83 HER17_RS02795 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Dickeya dadantii 3937 0.57 DDA3937_RS15495 3-mercaptopyruvate sulfurtransferase 0.80 DDA3937_RS18415 bifunctional aspartate kinase/homoserine dehydrogenase I low > 74
Dickeya dianthicola 67-19 0.56 HGI48_RS15600 3-mercaptopyruvate sulfurtransferase 0.79 HGI48_RS18345 bifunctional aspartate kinase/homoserine dehydrogenase I low > 71
Dickeya dianthicola ME23 0.55 DZA65_RS16675 3-mercaptopyruvate sulfurtransferase 0.79 DZA65_RS19485 bifunctional aspartate kinase/homoserine dehydrogenase I low > 75
Serratia liquefaciens MT49 0.47 IAI46_07285 3-mercaptopyruvate sulfurtransferase 0.82 IAI46_03030 bifunctional aspartate kinase/homoserine dehydrogenase I low > 86
Rahnella sp. WP5 0.43 EX31_RS21925 3-mercaptopyruvate sulfurtransferase 0.84 EX31_RS03945 bifunctional aspartate kinase/homoserine dehydrogenase I low > 89
Vibrio cholerae E7946 ATCC 55056 0.38 CSW01_17310 3-mercaptopyruvate sulfurtransferase 0.61 CSW01_11975 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62
Shewanella sp. ANA-3 0.33 Shewana3_3103 rhodanese domain-containing protein (RefSeq) 0.56 Shewana3_1139 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 73
Shewanella loihica PV-4 0.31 Shew_0968 3-mercaptopyruvate sulfurtransferase (RefSeq) 0.57 Shew_1079 thrA bifunctional aspartokinase I/homeserine dehydrogenase I (RefSeq) low > 60
Shewanella oneidensis MR-1 0.31 SO1261 mercaptopyruvate sulfurtransferase (NCBI ptt file) 0.56 SO3415 thrA aspartokinase I/homoserine dehydrogenase, threonine-sensitive (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.31 MIT1002_02146 3-mercaptopyruvate sulfurtransferase 0.53 MIT1002_03086 Aspartokinase I/homoserine dehydrogenase I low > 70
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3344.1 Thiosulfate sulfurtransferase, rhodanese (EC 2.8.1.1) 0.34 Xcc-8004.2957.1 Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) low > 74
Pedobacter sp. GW460-11-11-14-LB5 0.21 CA265_RS18335 sulfurtransferase 0.32 CA265_RS23475 aspartate kinase; homoserine dehydrogenase (EC 2.7.2.4; EC 1.1.1.3) (from data) low > 88
Lysobacter sp. OAE881 0.18 ABIE51_RS07585 sulfurtransferase 0.31 ABIE51_RS17520 bifunctional aspartate kinase/homoserine dehydrogenase I low > 62

Not shown: 54 genomes with orthologs for ECD_02413 only; 9 genomes with orthologs for ECD_00002 only