Conservation of cofitness between DZA65_RS15395 and DZA65_RS17770 in Dickeya dianthicola ME23

23 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Dickeya dianthicola ME23 1.0 DZA65_RS15395 tripartite tricarboxylate transporter substrate binding protein 1.0 DZA65_RS17770 acireductone dioxygenase 0.46 8
Dickeya dianthicola 67-19 1.00 HGI48_RS14460 tripartite tricarboxylate transporter substrate binding protein 0.95 HGI48_RS16680 acireductone dioxygenase low > 71
Dickeya dadantii 3937 0.96 DDA3937_RS14490 tripartite tricarboxylate transporter substrate binding protein 0.95 DDA3937_RS16610 acireductone dioxygenase low > 74
Enterobacter sp. TBS_079 0.78 MPMX20_03193 hypothetical protein 0.76 MPMX20_01266 Acireductone dioxygenase low > 85
Pantoea sp. MT58 0.78 IAI47_06210 tripartite tricarboxylate transporter substrate binding protein 0.79 IAI47_15210 acireductone dioxygenase low > 76
Serratia liquefaciens MT49 0.77 IAI46_17880 tripartite tricarboxylate transporter substrate binding protein 0.78 IAI46_04315 acireductone dioxygenase low > 86
Klebsiella michiganensis M5al 0.76 BWI76_RS20035 hypothetical protein 0.77 BWI76_RS07910 acireductone dioxygenase — —
Pseudomonas sp. S08-1 0.63 OH686_19995 Tripartite tricarboxylate transporter TctC family 0.56 OH686_00690 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase low > 80
Pseudomonas putida KT2440 0.62 PP_1418 putative Tricarboxylate transport protein TctC 0.22 PP_1832 putative Oxidase low > 96
Pseudomonas stutzeri RCH2 0.62 Psest_0206 Uncharacterized protein conserved in bacteria 0.57 Psest_1905 Uncharacterized conserved protein, contains double-stranded beta-helix domain low > 67
Pseudomonas fluorescens FW300-N1B4 0.62 Pf1N1B4_3313 Tricarboxylate transport protein TctC 0.54 Pf1N1B4_3782 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) low > 87
Pseudomonas simiae WCS417 0.62 PS417_07075 tricarboxylic transport membrane protein 0.39 PS417_19305 acireductone dioxygenase low > 88
Pseudomonas fluorescens GW456-L13 0.61 PfGW456L13_4526 Tricarboxylate transport protein TctC 0.57 PfGW456L13_4162 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) low > 87
Pseudomonas fluorescens FW300-N2E3 0.61 AO353_17580 tricarboxylic transporter 0.57 AO353_02235 acireductone dioxygenase low > 101
Pseudomonas fluorescens FW300-N2E2 0.61 Pf6N2E2_2768 Tricarboxylate transport protein TctC 0.39 Pf6N2E2_5824 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase (EC 1.13.11.54) low > 103
Pseudomonas fluorescens SBW25 0.61 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.42 PFLU_RS21270 acireductone dioxygenase low > 109
Pseudomonas fluorescens FW300-N2C3 0.61 AO356_04615 tricarboxylic transporter 0.40 AO356_19550 acireductone dioxygenase low > 104
Pseudomonas fluorescens SBW25-INTG 0.61 PFLU_RS07150 tripartite tricarboxylate transporter substrate binding protein 0.42 PFLU_RS21270 acireductone dioxygenase low > 109
Pseudomonas sp. RS175 0.61 PFR28_00681 hypothetical protein 0.42 PFR28_03124 Acireductone dioxygenase low > 88
Pseudomonas syringae pv. syringae B728a 0.61 Psyr_3966 Uncharacterized protein UPF0065 0.54 Psyr_1856 acireductone dioxygenase apoprotein low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.61 Psyr_3966 Uncharacterized protein UPF0065 0.54 Psyr_1856 acireductone dioxygenase apoprotein low > 86
Marinobacter adhaerens HP15 0.31 HP15_2661 Citrate uptake transporter, substrate-binding component TctC (from data) 0.50 HP15_1261 acireductone dioxygenase, ARD low > 73
Azospirillum brasilense Sp245 0.21 AZOBR_RS31445 C4-dicarboxylate ABC transporter substrate-binding protein 0.46 AZOBR_RS10215 acireductone dioxygenase low > 97
Azospirillum sp. SherDot2 0.15 MPMX19_03915 hypothetical protein 0.47 MPMX19_01173 Acireductone dioxygenase low > 112

Not shown: 16 genomes with orthologs for DZA65_RS15395 only; 10 genomes with orthologs for DZA65_RS17770 only