Conservation of cofitness between CSW01_04865 and CSW01_17515 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_04865 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 1.0 CSW01_17515 beta-phosphoglucomutase family hydrolase 0.40 17
Pantoea sp. MT58 0.85 IAI47_14020 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 IAI47_04340 fructose-1-phosphate/6-phosphogluconate phosphatase low > 76
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13505_RS03285 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 PagCFBP13505_RS16630 fructose-1-phosphate/6-phosphogluconate phosphatase low > 74
Dickeya dadantii 3937 0.84 DDA3937_RS06175 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 DDA3937_RS16205 fructose-1-phosphate/6-phosphogluconate phosphatase — —
Dickeya dianthicola ME23 0.84 DZA65_RS06565 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.30 DZA65_RS17410 fructose-1-phosphate/6-phosphogluconate phosphatase low > 75
Pectobacterium carotovorum WPP14 0.83 HER17_RS15240 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.29 HER17_RS05085 fructose-1-phosphate/6-phosphogluconate phosphatase low > 75
Dickeya dianthicola 67-19 0.83 HGI48_RS06220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 HGI48_RS16315 fructose-1-phosphate/6-phosphogluconate phosphatase — —
Rahnella sp. WP5 0.82 EX31_RS23125 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.30 EX31_RS07760 fructose-1-phosphate/6-phosphogluconate phosphatase low > 89
Serratia liquefaciens MT49 0.82 IAI46_05935 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 IAI46_03885 fructose-1-phosphate/6-phosphogluconate phosphatase low > 86
Shewanella sp. ANA-3 0.82 Shewana3_0996 rRNA large subunit methyltransferase (RefSeq) 0.26 Shewana3_2067 HAD family hydrolase (RefSeq) low > 73
Escherichia coli HS(pFamp)R (ATCC 700891) 0.82 OHPLBJKB_03070 Ribosomal RNA large subunit methyltransferase H 0.33 OHPLBJKB_01043 Fructose-1-phosphate phosphatase YqaB — —
Escherichia coli BL21 0.82 ECD_00605 23S rRNA m(3)Psi1915 pseudouridine methyltransferase, SAM-dependent 0.33 ECD_02545 fructose-1-P and 6-phosphogluconate phosphatase — —
Escherichia coli Nissle 1917 0.82 ECOLIN_RS03465 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 ECOLIN_RS15000 fructose-1-phosphate/6-phosphogluconate phosphatase — —
Escherichia coli BW25113 0.82 b0636 ybeA hypothetical protein (NCBI) 0.33 b2690 yqaB predicted hydrolase (NCBI) low > 76
Erwinia tracheiphila SCR3 0.81 LU632_RS16370 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 LU632_RS15700 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase low > 74
Escherichia coli ECRC100 0.81 OKFHMN_07360 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 OKFHMN_20750 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase low > 79
Escherichia coli ECOR27 0.81 NOLOHH_23735 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 NOLOHH_12590 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase low > 76
Escherichia coli ECRC98 0.81 JDDGAC_11005 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 JDDGAC_24415 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase — —
Escherichia coli ECRC62 0.81 BNILDI_21745 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 BNILDI_11150 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase — —
Escherichia coli ECRC102 0.81 NIAGMN_05415 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 NIAGMN_18520 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase — —
Escherichia coli ECRC99 0.81 KEDOAH_20610 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 KEDOAH_07385 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase — —
Escherichia coli ECOR38 0.81 HEPCGN_00915 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 HEPCGN_19945 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase low > 88
Klebsiella pneumoniae MKP103 0.81 KDGMDA_16400 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.32 KDGMDA_02800 fructose-1-phosphate/6-phosphogluconate phosphatase low > 95
Escherichia fergusonii Becca 0.81 EFB2_03456 Ribosomal RNA large subunit methyltransferase H 0.33 EFB2_01236 Fructose-1-phosphate phosphatase YqaB low > 86
Escherichia coli ECRC101 0.81 MCAODC_26575 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.33 MCAODC_11275 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase — —
Enterobacter asburiae PDN3 0.81 EX28DRAFT_2327 rRNA large subunit m3Psi methyltransferase RlmH 0.30 EX28DRAFT_2776 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase — —
Erwinia tracheiphila HP pepo 2.2 0.81 IJEDHG_02460 rlmH 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 IJEDHG_01570 yqaB fructose-1-phosphate/6-phosphogluconate phosphatase low > 61
Enterobacter sp. TBS_079 0.81 MPMX20_01295 Ribosomal RNA large subunit methyltransferase H 0.30 MPMX20_03570 Fructose-1-phosphate phosphatase YqaB low > 85
Klebsiella michiganensis M5al 0.80 BWI76_RS08040 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.31 BWI76_RS22130 fructose-1-phosphate/6-phosphogluconate phosphatase low > 92
Erwinia amylovora T8 0.80 OLJFJH_17220 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.32 OLJFJH_09615 fructose-1-phosphate/6-phosphogluconate phosphatase low > 58
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.80 GFF4549 LSU m3Psi1915 methyltransferase RlmH 0.33 GFF1599 Putative phosphatase YqaB low > 78
Alteromonas macleodii MIT1002 0.77 MIT1002_01852 Ribosomal RNA large subunit methyltransferase H 0.38 MIT1002_00181 Fructose-1-phosphate phosphatase YqaB — —
Pseudomonas lactucae CFBP13502 0.64 GEMAOFIL_05099 Ribosomal RNA large subunit methyltransferase H 0.18 GEMAOFIL_03919 Hexitol phosphatase A — —
Acidovorax sp. GW101-3H11 0.43 Ac3H11_2418 LSU m3Psi1915 methyltransferase RlmH 0.15 Ac3H11_2632 Beta-phosphoglucomutase (EC 5.4.2.6) low > 79
Cellulophaga baltica 18 0.29 M666_RS17950 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.23 M666_RS02760 beta-phosphoglucomutase low > 67
Bifidobacterium breve UCC2003 0.29 BBR_RS19685 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.19 BBR_RS19210 beta-phosphoglucomutase low > 34
Pedobacter sp. GW460-11-11-14-LB5 0.29 CA265_RS16470 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.21 CA265_RS24650 beta-phosphoglucomutase low > 88
Mucilaginibacter yixingensis YX-36 DSM 26809 0.28 ABZR88_RS17055 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH 0.25 ABZR88_RS19980 HAD family phosphatase low > 71
Bacteroides thetaiotaomicron VPI-5482 0.24 BT1562 conserved hypothetical protein (NCBI ptt file) 0.17 BT2127 putative beta-phosphoglucomutase (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.24 BACOVA_04305 putative rRNA large subunit m3Psi methyltransferase RlmH 0.17 BACOVA_03230 HAD hydrolase, family IA, variant 3 low > 96

Not shown: 71 genomes with orthologs for CSW01_04865 only; 3 genomes with orthologs for CSW01_17515 only