Conservation of cofitness between CSW01_10020 and CSW01_13810 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_10020 ROK family protein 1.0 CSW01_13810 phosphoenolpyruvate carboxykinase (ATP) 0.93 4
Dickeya dadantii 3937 0.50 DDA3937_RS10675 ROK family transcriptional regulator 0.81 DDA3937_RS19610 phosphoenolpyruvate carboxykinase (ATP) low > 74
Pectobacterium carotovorum WPP14 0.50 HER17_RS10735 ROK family transcriptional regulator 0.80 HER17_RS01710 phosphoenolpyruvate carboxykinase (ATP) low > 75
Serratia liquefaciens MT49 0.50 IAI46_11685 ROK family transcriptional regulator 0.81 IAI46_23770 phosphoenolpyruvate carboxykinase (ATP) low > 86
Rahnella sp. WP5 0.50 EX31_RS16985 ROK family transcriptional regulator 0.79 EX31_RS04780 phosphoenolpyruvate carboxykinase (ATP) low > 89
Dickeya dianthicola ME23 0.49 DZA65_RS11145 ROK family transcriptional regulator 0.81 DZA65_RS20830 phosphoenolpyruvate carboxykinase (ATP) low > 75
Dickeya dianthicola 67-19 0.49 HGI48_RS10675 ROK family transcriptional regulator 0.81 HGI48_RS19740 phosphoenolpyruvate carboxykinase (ATP) 0.41 46
Erwinia amylovora T8 0.48 OLJFJH_14275 transcriptional regulator 0.78 OLJFJH_04150 phosphoenolpyruvate carboxykinase (ATP) 0.52 39
Enterobacter asburiae PDN3 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase 0.79 EX28DRAFT_4140 phosphoenolpyruvate carboxykinase (ATP) low > 76
Enterobacter sp. TBS_079 0.47 MPMX20_02063 Protein mlc 0.79 MPMX20_04290 Phosphoenolpyruvate carboxykinase (ATP) low > 85
Erwinia tracheiphila SCR3 0.47 LU632_RS12305 ROK family transcriptional regulator 0.78 LU632_RS22930 pckA phosphoenolpyruvate carboxykinase (ATP) low > 74
Klebsiella michiganensis M5al 0.47 BWI76_RS15955 transcriptional regulator 0.79 BWI76_RS26155 phosphoenolpyruvate carboxykinase (ATP) low > 92
Escherichia coli ECRC99 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc 0.81 KEDOAH_11095 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon 0.81 GFF615 Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) low > 78
Escherichia coli ECOR38 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc 0.81 HEPCGN_15865 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli Nissle 1917 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc 0.81 ECOLIN_RS19435 phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECRC102 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc 0.81 NIAGMN_14815 pckA phosphoenolpyruvate carboxykinase (ATP) — —
Escherichia coli ECOR27 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc 0.81 NOLOHH_08835 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECRC62 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc 0.81 BNILDI_02685 pckA phosphoenolpyruvate carboxykinase (ATP) low > 75
Escherichia coli ECRC98 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc 0.81 JDDGAC_20675 pckA phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli ECRC101 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc 0.81 MCAODC_07575 pckA phosphoenolpyruvate carboxykinase (ATP) low > 87
Escherichia coli ECRC100 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc 0.81 OKFHMN_17045 pckA phosphoenolpyruvate carboxykinase (ATP) low > 80
Escherichia fergusonii Becca 0.47 EFB2_02398 Protein mlc 0.81 EFB2_00425 Phosphoenolpyruvate carboxykinase (ATP) low > 86
Escherichia coli BW25113 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) 0.81 b3403 pck phosphoenolpyruvate carboxykinase (NCBI) low > 76
Escherichia coli BL21 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor 0.81 ECD_03255 phosphoenolpyruvate carboxykinase [ATP] — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.46 OHPLBJKB_02132 Protein mlc 0.81 OHPLBJKB_00300 Phosphoenolpyruvate carboxykinase (ATP) low > 73
Pantoea sp. MT58 0.45 IAI47_09750 ROK family transcriptional regulator 0.77 IAI47_01830 phosphoenolpyruvate carboxykinase (ATP) low > 76
Pontibacter actiniarum KMM 6156, DSM 19842 0.20 CA264_08710 sugar kinase 0.44 CA264_05270 phosphoenolpyruvate carboxykinase (ATP) — —
Phaeobacter inhibens DSM 17395 0.19 PGA1_262p00420 Transcriptional regulator/sugar kinase 0.39 PGA1_c01140 phosphoenolpyruvate carboxykinase 0.18 47
Parabacteroides merdae CL09T00C40 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator 0.72 HMPREF1078_RS07235 phosphoenolpyruvate carboxykinase (ATP) — —
Phocaeicola vulgatus CL09T03C04 0.18 HMPREF1058_RS07285 ROK family transcriptional regulator 0.72 HMPREF1058_RS10065 phosphoenolpyruvate carboxykinase (ATP) — —
Phocaeicola dorei CL03T12C01 0.18 ABI39_RS21185 ROK family transcriptional regulator 0.72 ABI39_RS06685 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides ovatus ATCC 8483 0.18 BACOVA_01791 hypothetical protein 0.72 BACOVA_02011 phosphoenolpyruvate carboxykinase (ATP) — —
Bosea sp. OAE506 0.18 ABIE41_RS06840 ROK family protein 0.40 ABIE41_RS02665 phosphoenolpyruvate carboxykinase low > 77
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS04110 ROK family transcriptional regulator 0.72 HMPREF1181_RS01170 phosphoenolpyruvate carboxykinase (ATP) — —
Bacteroides thetaiotaomicron VPI-5482 0.17 BT0433 putative xylose repressor (NCBI ptt file) 0.73 BT2790 phosphoenolpyruvate carboxykinase [ATP] (NCBI ptt file) — —
Sinorhizobium meliloti 1021 0.15 SMa2303 ROK family transcriptional regulator 0.41 SMc02562 phosphoenolpyruvate carboxykinase low > 103

Not shown: 6 genomes with orthologs for CSW01_10020 only; 34 genomes with orthologs for CSW01_13810 only