Conservation of cofitness between CSW01_01030 and CSW01_13590 in Vibrio cholerae E7946 ATCC 55056

31 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01030 AraC family transcriptional regulator 1.0 CSW01_13590 DNA-binding response regulator 0.69 1
Shewanella oneidensis MR-1 0.31 SO0766 transcriptional regulator, AraC/XylS family (NCBI ptt file) 0.46 SO4477 cpxR transcriptional regulatory protein CpxR (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.31 Shewana3_3537 AraC family transcriptional regulator (RefSeq) 0.46 Shewana3_0253 two component transcriptional regulator (RefSeq) low > 73
Pseudomonas aeruginosa PA14 0.30 IKLFDK_07760 AraC family transcriptional regulator 0.40 IKLFDK_16285 DNA-binding response regulator low > 101
Pseudomonas sp. SVBP6 0.30 COO64_RS23670 AraC family transcriptional regulator 0.39 COO64_RS21775 response regulator transcription factor low > 93
Shewanella loihica PV-4 0.29 Shew_1463 AraC family transcriptional regulator (RefSeq) 0.57 Shew_3570 two component transcriptional regulator (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.29 RS_RS22500 AraC family transcriptional regulator 0.45 RS_RS24130 DNA-binding response regulator low > 80
Pseudomonas fluorescens GW456-L13 0.28 PfGW456L13_3131 L-rhamnose operon transcriptional activator RhaR 0.39 PfGW456L13_4409 DNA-binding response regulator low > 87
Ralstonia solanacearum IBSBF1503 0.26 RALBFv3_RS11255 AraC family transcriptional regulator 0.45 RALBFv3_RS17290 DNA-binding response regulator low > 76
Ralstonia solanacearum UW163 0.26 UW163_RS02330 AraC family transcriptional regulator 0.45 UW163_RS21855 DNA-binding response regulator — —
Shewanella amazonensis SB2B 0.26 Sama_1551 AraC/XylS family transcriptional regulator (RefSeq) 0.55 Sama_3432 response regulator receiver protein (RefSeq) low > 62
Pseudomonas sp. RS175 0.21 PFR28_02366 HTH-type transcriptional activator RhaS 0.38 PFR28_03323 Transcriptional regulatory protein CpxR low > 88
Pseudomonas fluorescens FW300-N2C3 0.20 AO356_24435 AraC family transcriptional regulator 0.47 AO356_00725 chemotaxis protein CheY low > 104
Pseudomonas simiae WCS417 0.20 PS417_03390 AraC family transcriptional regulator 0.46 PS417_18150 chemotaxis protein CheY low > 88
Pseudomonas fluorescens FW300-N2E2 0.20 Pf6N2E2_575 Transcriptional regulator, AraC family 0.47 Pf6N2E2_216 Copper-sensing two-component system response regulator CpxR low > 103
Erwinia tracheiphila SCR3 0.13 LU632_RS11690 rhaS HTH-type transcriptional activator RhaS 0.56 LU632_RS21855 cpxR envelope stress response regulator transcription factor CpxR low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_04145 HTH-type transcriptional activator RhaS 0.54 OHPLBJKB_04138 Transcriptional regulatory protein CpxR low > 73
Escherichia coli ECOR27 0.13 NOLOHH_06020 rhaS HTH-type transcriptional activator RhaS 0.54 NOLOHH_05980 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli BW25113 0.13 b3905 rhaS DNA-binding transcriptional activator, L-rhamnose-binding (NCBI) 0.54 b3912 cpxR DNA-binding response regulator in two-component regulatory system with CpxA (NCBI) low > 76
Escherichia coli ECRC62 0.13 BNILDI_05505 rhaS HTH-type transcriptional activator RhaS 0.54 BNILDI_05545 cpxR envelope stress response regulator transcription factor CpxR low > 75
Escherichia coli ECRC102 0.13 NIAGMN_11645 rhaS HTH-type transcriptional activator RhaS 0.54 NIAGMN_11600 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli BL21 0.13 ECD_03791 transcriptional activator of rhaBAD and rhaT 0.54 ECD_03798 response regulator in two-component regulatory system with CpxA low > 61
Escherichia coli ECRC99 0.13 KEDOAH_14265 rhaS HTH-type transcriptional activator RhaS 0.54 KEDOAH_14310 cpxR envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECRC100 0.13 OKFHMN_13890 rhaS HTH-type transcriptional activator RhaS 0.54 OKFHMN_13845 cpxR envelope stress response regulator transcription factor CpxR low > 80
Escherichia coli ECRC101 0.13 MCAODC_04390 rhaS HTH-type transcriptional activator RhaS 0.54 MCAODC_04345 cpxR envelope stress response regulator transcription factor CpxR low > 87
Escherichia coli ECRC98 0.13 JDDGAC_17515 rhaS HTH-type transcriptional activator RhaS 0.54 JDDGAC_17470 cpxR envelope stress response regulator transcription factor CpxR low > 86
Escherichia fergusonii Becca 0.13 EFB2_04712 HTH-type transcriptional activator RhaS 0.54 EFB2_04705 Transcriptional regulatory protein CpxR low > 86
Pseudomonas syringae pv. syringae B728a 0.12 Psyr_3543 transcriptional regulator, AraC family 0.45 Psyr_3793 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.12 Psyr_3543 transcriptional regulator, AraC family 0.45 Psyr_3793 Response regulator receiver:Transcriptional regulatory protein, C-terminal low > 86
Escherichia coli Nissle 1917 0.12 ECOLIN_RS22500 HTH-type transcriptional activator RhaS 0.55 ECOLIN_RS22540 envelope stress response regulator transcription factor CpxR — —
Escherichia coli ECOR38 0.12 HEPCGN_12530 rhaS HTH-type transcriptional activator RhaS 0.54 HEPCGN_12490 cpxR envelope stress response regulator transcription factor CpxR low > 87
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF2266 L-rhamnose operon regulatory protein RhaS 0.55 GFF2280 Copper-sensing two-component system response regulator CpxR low > 78

Not shown: 1 genomes with orthologs for CSW01_01030 only; 33 genomes with orthologs for CSW01_13590 only