Conservation of cofitness between CSW01_01175 and CSW01_13470 in Vibrio cholerae E7946 ATCC 55056

17 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01175 formamidopyrimidine-DNA glycosylase 1.0 CSW01_13470 transcriptional regulator 0.73 6
Rahnella sp. WP5 0.60 EX31_RS14455 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.36 EX31_RS23790 transcriptional regulator low > 89
Shewanella oneidensis MR-1 0.60 SO4726 mutM formamidopyrimidine-DNA glycosylase (NCBI ptt file) 0.47 SO3584 conserved hypothetical protein (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.59 IAI46_24810 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.45 IAI46_24615 HTH domain-containing protein low > 86
Shewanella amazonensis SB2B 0.58 Sama_0117 formamidopyrimidine-DNA glycosylase (RefSeq) 0.49 Sama_2786 putative transcriptional regulator (RefSeq) low > 62
Shewanella loihica PV-4 0.58 Shew_3690 formamidopyrimidine-DNA glycosylase (RefSeq) 0.50 Shew_0915 putative transcriptional regulator (RefSeq) — —
Shewanella sp. ANA-3 0.57 Shewana3_4084 formamidopyrimidine-DNA glycosylase (RefSeq) 0.47 Shewana3_3176 transcriptional regulator (RefSeq) low > 73
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS13335 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.39 ABZR86_RS09450 winged helix-turn-helix transcriptional regulator low > 74
Pseudomonas sp. SVBP6 0.53 COO64_RS12835 mutM bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.41 COO64_RS10740 metalloregulator ArsR/SmtB family transcription factor low > 93
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08320 5-hydroxymethyluracil DNA glycosylase 0.39 AO353_17750 transcriptional regulator low > 101
Herbaspirillum seropedicae SmR1 0.42 HSERO_RS19545 formamidopyrimidine-DNA glycosylase 0.38 HSERO_RS06885 transcriptional regulator — —
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS02040 formamidopyrimidine-DNA glycosylase 0.40 RR42_RS27660 transcriptional regulator — —
Variovorax sp. SCN45 0.38 GFF2353 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.41 GFF3507 Transcriptional regulator, DeoR family low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF825 Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) 0.37 GFF5265 hypothetical protein low > 90
Variovorax sp. OAS795 0.35 ABID97_RS23725 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.40 ABID97_RS01035 metalloregulator ArsR/SmtB family transcription factor low > 91
Rhizobium sp. OAE497 0.33 ABIE40_RS01590 bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase 0.36 ABIE40_RS04555 MarR family transcriptional regulator low > 107
Synechococcus elongatus PCC 7942 0.30 Synpcc7942_1323 fpg DNA-(apurinic or apyrimidinic site) lyase / Formamidopyrimidine-DNA glycosylase 0.26 Synpcc7942_1733 sufR transcriptional regulator low > 38
Synechocystis sp000284455 PCC 6803 0.29 SGL_RS11245 DNA-formamidopyrimidine glycosylase 0.29 SGL_RS15245 iron-sulfur cluster biosynthesis transcriptional regulator SufR low > 52

Not shown: 85 genomes with orthologs for CSW01_01175 only; 0 genomes with orthologs for CSW01_13470 only