Conservation of cofitness between CSW01_01085 and CSW01_12815 in Vibrio cholerae E7946 ATCC 55056

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_01085 MurR/RpiR family transcriptional regulator 1.0 CSW01_12815 RNA polymerase sigma-54 factor 0.45 17
Serratia liquefaciens MT49 0.40 IAI46_19515 MurR/RpiR family transcriptional regulator 0.62 IAI46_22470 RNA polymerase factor sigma-54 — —
Klebsiella michiganensis M5al 0.38 BWI76_RS21290 DNA-binding transcriptional regulator 0.62 BWI76_RS25265 RNA polymerase factor sigma-54 — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF2466 Sialic acid utilization regulator, RpiR family 0.63 GFF2946 RNA polymerase sigma-54 factor RpoN low > 78
Escherichia coli BW25113 0.36 b2427 yfeT predicted DNA-binding transcriptional regulator (NCBI) 0.62 b3202 rpoN DNA-directed RNA polymerase subunit N (NCBI) — —
Escherichia coli ECRC102 0.36 NIAGMN_19910 murR HTH-type transcriptional regulator MurR 0.63 NIAGMN_15700 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC100 0.36 OKFHMN_22140 murR HTH-type transcriptional regulator MurR 0.63 OKFHMN_17940 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC98 0.36 JDDGAC_26090 murR HTH-type transcriptional regulator MurR 0.63 JDDGAC_21565 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC101 0.36 MCAODC_12670 murR HTH-type transcriptional regulator MurR 0.63 MCAODC_08460 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC99 0.36 KEDOAH_06080 murR HTH-type transcriptional regulator MurR 0.63 KEDOAH_10210 rpoN RNA polymerase factor sigma-54 — —
Rahnella sp. WP5 0.36 EX31_RS21865 MurR/RpiR family transcriptional regulator 0.63 EX31_RS12400 RNA polymerase factor sigma-54 low > 89
Escherichia coli ECOR38 0.36 HEPCGN_21315 murR HTH-type transcriptional regulator MurR 0.63 HEPCGN_16815 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECRC62 0.36 BNILDI_12685 murR HTH-type transcriptional regulator MurR 0.63 BNILDI_01795 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli ECOR27 0.36 NOLOHH_13820 murR HTH-type transcriptional regulator MurR 0.62 NOLOHH_09740 rpoN RNA polymerase factor sigma-54 — —
Pantoea sp. MT58 0.36 IAI47_04910 MurR/RpiR family transcriptional regulator 0.62 IAI47_17185 RNA polymerase factor sigma-54 low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.36 OHPLBJKB_01296 HTH-type transcriptional regulator MurR 0.63 OHPLBJKB_00498 RNA polymerase sigma-54 factor — —
Escherichia coli BL21 0.36 ECD_02327 repressor for murPQ, MurNAc 6-P inducible 0.63 ECD_03067 RNA polymerase, sigma 54 (sigma N) factor low > 61
Enterobacter asburiae PDN3 0.35 EX28DRAFT_0085 transcriptional regulator, RpiR family 0.62 EX28DRAFT_3256 RNA polymerase, sigma 54 subunit, RpoN/SigL — —
Erwinia amylovora T8 0.35 OLJFJH_10280 MurR/RpiR family transcriptional regulator 0.61 OLJFJH_07070 RNA polymerase factor sigma-54 low > 58
Enterobacter sp. TBS_079 0.35 MPMX20_03432 HTH-type transcriptional regulator MurR 0.61 MPMX20_04108 RNA polymerase sigma-54 factor — —
Erwinia tracheiphila SCR3 0.34 LU632_RS18000 MurR/RpiR family transcriptional regulator 0.60 LU632_RS21280 rpoN RNA polymerase factor sigma-54 — —
Escherichia coli Nissle 1917 0.34 ECOLIN_RS14490 MurR/RpiR family transcriptional regulator 0.63 ECOLIN_RS18425 RNA polymerase factor sigma-54 — —
Escherichia fergusonii Becca 0.34 EFB2_01335 HTH-type transcriptional regulator MurR 0.63 EFB2_00621 RNA polymerase sigma-54 factor — —
Lysobacter sp. OAE881 0.19 ABIE51_RS13700 MurR/RpiR family transcriptional regulator 0.38 ABIE51_RS15955 RNA polymerase factor sigma-54 low > 62
Rhodanobacter sp. FW510-T8 0.18 OKGIIK_12345 rpiR transcriptional regulator 0.38 OKGIIK_02265 RNA polymerase factor sigma-54 low > 52
Rhodanobacter denitrificans MT42 0.18 LRK55_RS11245 MurR/RpiR family transcriptional regulator 0.40 LRK55_RS12575 RNA polymerase factor sigma-54 low > 63
Rhodanobacter denitrificans FW104-10B01 0.18 LRK54_RS11515 MurR/RpiR family transcriptional regulator 0.40 LRK54_RS12875 RNA polymerase factor sigma-54 low > 59
Rhodanobacter sp000427505 FW510-R12 0.17 LRK53_RS17010 MurR/RpiR family transcriptional regulator 0.37 LRK53_RS15705 RNA polymerase factor sigma-54 low > 60
Dyella japonica UNC79MFTsu3.2 0.15 ABZR86_RS12100 MurR/RpiR family transcriptional regulator 0.40 ABZR86_RS19815 RNA polymerase factor sigma-54 0.43 69
Caulobacter crescentus NA1000 Δfur 0.11 CCNA_01355 transcriptional regulator IolR 0.28 CCNA_03713 RNA polymerase sigma-54 factor rpoN low > 67
Caulobacter crescentus NA1000 0.11 CCNA_01355 transcriptional regulator IolR 0.28 CCNA_03713 RNA polymerase sigma-54 factor rpoN 0.44 61

Not shown: 1 genomes with orthologs for CSW01_01085 only; 76 genomes with orthologs for CSW01_12815 only