Conservation of cofitness between CSW01_12595 and CSW01_12730 in Vibrio cholerae E7946 ATCC 55056

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_12595 2-isopropylmalate synthase 1.0 CSW01_12730 aspartate carbamoyltransferase regulatory subunit 0.77 3
Serratia liquefaciens MT49 0.74 IAI46_03355 2-isopropylmalate synthase 0.66 IAI46_02270 aspartate carbamoyltransferase regulatory subunit low > 87
Pectobacterium carotovorum WPP14 0.73 HER17_RS03085 2-isopropylmalate synthase 0.66 HER17_RS19515 aspartate carbamoyltransferase regulatory subunit low > 75
Dickeya dadantii 3937 0.71 DDA3937_RS18115 2-isopropylmalate synthase 0.67 DDA3937_RS01920 aspartate carbamoyltransferase regulatory subunit low > 74
Dickeya dianthicola 67-19 0.71 HGI48_RS18055 2-isopropylmalate synthase 0.66 HGI48_RS01895 aspartate carbamoyltransferase regulatory subunit low > 71
Dickeya dianthicola ME23 0.71 DZA65_RS19200 2-isopropylmalate synthase 0.66 DZA65_RS01965 aspartate carbamoyltransferase regulatory subunit low > 75
Rahnella sp. WP5 0.71 EX31_RS03680 2-isopropylmalate synthase 0.62 EX31_RS12780 aspartate carbamoyltransferase regulatory subunit low > 89
Escherichia coli ECRC101 0.70 MCAODC_01230 2-isopropylmalate synthase 0.66 MCAODC_02375 pyrI aspartate carbamoyltransferase regulatory subunit low > 87
Escherichia coli ECRC98 0.70 JDDGAC_14310 2-isopropylmalate synthase 0.66 JDDGAC_15510 pyrI aspartate carbamoyltransferase regulatory subunit low > 87
Escherichia coli Nissle 1917 0.70 ECOLIN_RS00400 2-isopropylmalate synthase 0.66 ECOLIN_RS24620 aspartate carbamoyltransferase regulatory subunit low > 55
Escherichia coli ECRC102 0.70 NIAGMN_08565 2-isopropylmalate synthase 0.66 NIAGMN_09720 pyrI aspartate carbamoyltransferase regulatory subunit low > 80
Escherichia coli ECRC62 0.70 BNILDI_08550 2-isopropylmalate synthase 0.66 BNILDI_07380 pyrI aspartate carbamoyltransferase regulatory subunit low > 75
Escherichia coli ECOR38 0.70 HEPCGN_08695 2-isopropylmalate synthase 0.66 HEPCGN_10065 pyrI aspartate carbamoyltransferase regulatory subunit low > 88
Escherichia coli ECOR27 0.70 NOLOHH_03060 2-isopropylmalate synthase 0.66 NOLOHH_04130 pyrI aspartate carbamoyltransferase regulatory subunit low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_03583 2-isopropylmalate synthase 0.66 OHPLBJKB_03790 Aspartate carbamoyltransferase regulatory chain low > 74
Escherichia coli BL21 0.70 ECD_00076 2-isopropylmalate synthase 0.66 ECD_04112 aspartate carbamoyltransferase, regulatory subunit low > 61
Escherichia coli ECRC100 0.70 OKFHMN_10715 2-isopropylmalate synthase 0.66 OKFHMN_11870 pyrI aspartate carbamoyltransferase regulatory subunit low > 79
Escherichia coli BW25113 0.70 b0074 leuA 2-isopropylmalate synthase (NCBI) 0.66 b4244 pyrI aspartate carbamoyltransferase regulatory subunit (NCBI) low > 76
Escherichia coli ECRC99 0.70 KEDOAH_17440 2-isopropylmalate synthase 0.66 KEDOAH_16285 pyrI aspartate carbamoyltransferase regulatory subunit — —
Escherichia fergusonii Becca 0.70 EFB2_03971 2-isopropylmalate synthase 0.66 EFB2_04289 Aspartate carbamoyltransferase regulatory chain low > 86
Klebsiella michiganensis M5al 0.70 BWI76_RS04680 2-isopropylmalate synthase 0.66 BWI76_RS02990 aspartate carbamoyltransferase regulatory subunit low > 92
Enterobacter asburiae PDN3 0.69 EX28DRAFT_3670 2-isopropylmalate synthase (EC 2.3.3.13) 0.63 EX28DRAFT_3445 aspartate carbamoyltransferase, regulatory subunit — —
Erwinia tracheiphila SCR3 0.69 LU632_RS02880 leuA 2-isopropylmalate synthase 0.64 LU632_RS20955 pyrI aspartate carbamoyltransferase regulatory subunit low > 73
Erwinia tracheiphila HP pepo 2.2 0.69 IJEDHG_05995 leuA 2-isopropylmalate synthase 0.64 IJEDHG_14055 pyrI aspartate carbamoyltransferase regulatory subunit low > 61
Klebsiella pneumoniae MRSN742743 0.69 GJGHJB_04206 leuA 2-isopropylmalate synthase 0.64 GJGHJB_04487 pyrI aspartate carbamoyltransferase regulatory subunit low > 83
Klebsiella pneumoniae MKP103 0.69 KDGMDA_12910 2-isopropylmalate synthase 0.64 KDGMDA_11460 aspartate carbamoyltransferase regulatory subunit low > 94
Enterobacter sp. TBS_079 0.69 MPMX20_00769 2-isopropylmalate synthase 0.63 MPMX20_00543 Aspartate carbamoyltransferase regulatory chain low > 85
Pantoea sp. MT58 0.68 IAI47_16000 2-isopropylmalate synthase 0.65 IAI47_16865 aspartate carbamoyltransferase regulatory subunit low > 76
Pantoea agglomerans CFBP13505 P0401 0.68 PagCFBP13516_RS16310 leuA 2-isopropylmalate synthase 0.65 PagCFBP13516_RS17085 pyrI aspartate carbamoyltransferase regulatory subunit low > 80
Erwinia amylovora T8 0.67 OLJFJH_01285 2-isopropylmalate synthase 0.63 OLJFJH_07325 aspartate carbamoyltransferase regulatory subunit low > 58
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS16665 2-isopropylmalate synthase 0.36 HMPREF1078_RS01345 aspartate carbamoyltransferase regulatory subunit — —
Phocaeicola dorei CL03T12C01 0.45 ABI39_RS10195 2-isopropylmalate synthase 0.32 ABI39_RS17405 aspartate carbamoyltransferase regulatory subunit — —
Phocaeicola vulgatus CL09T03C04 0.45 HMPREF1058_RS14545 2-isopropylmalate synthase 0.33 HMPREF1058_RS03815 aspartate carbamoyltransferase regulatory subunit — —
Bacteroides thetaiotaomicron VPI-5482 0.45 BT1861 2-isopropylmalate synthase (EC 2.3.3.13) (from data) 0.33 BT0741 aspartate carbamoyltransferase regulatory chain (NCBI ptt file) — —
Bacteroides ovatus ATCC 8483 0.44 BACOVA_04604 2-isopropylmalate synthase 0.34 BACOVA_02449 aspartate carbamoyltransferase, regulatory subunit — —
Bacteroides stercoris CC31F 0.44 HMPREF1181_RS14150 2-isopropylmalate synthase 0.38 HMPREF1181_RS14995 aspartate carbamoyltransferase regulatory subunit low > 56
Methanococcus maripaludis JJ 0.29 MMJJ_RS08870 2-isopropylmalate synthase 0.37 MMJJ_RS08645 aspartate carbamoyltransferase regulatory subunit — —
Methanococcus maripaludis S2 0.29 MMP_RS05500 2-isopropylmalate synthase 0.37 MMP_RS05705 aspartate carbamoyltransferase regulatory subunit — —

Not shown: 43 genomes with orthologs for CSW01_12595 only; 2 genomes with orthologs for CSW01_12730 only