Conservation of cofitness between CSW01_06750 and CSW01_12070 in Vibrio cholerae E7946 ATCC 55056

29 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF 1.0 CSW01_12070 hypothetical protein 0.64 14
Pseudomonas sp. SVBP6 0.72 COO64_RS09915 prpF 2-methylaconitate cis-trans isomerase PrpF 0.36 COO64_RS15960 TSUP family transporter low > 93
Shewanella loihica PV-4 0.71 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) 0.48 Shew_2464 hypothetical protein (RefSeq) low > 60
Shewanella sp. ANA-3 0.70 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) 0.53 Shewana3_2613 hypothetical protein (RefSeq) low > 73
Lysobacter sp. OAE881 0.70 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF 0.43 ABIE51_RS11860 TSUP family transporter — —
Pseudomonas fluorescens GW456-L13 0.70 PfGW456L13_4115 2-methylaconitate cis-trans isomerase 0.37 PfGW456L13_369 Putative membrane protein YfcA low > 87
Shewanella oneidensis MR-1 0.70 SO0342 conserved hypothetical protein (NCBI ptt file) 0.52 SO2846 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.67 Sama_3297 hypothetical protein (RefSeq) 0.49 Sama_1266 hypothetical protein (RefSeq) low > 62
Azospirillum brasilense Sp245 0.64 AZOBR_RS24310 3-methylitaconate isomerase 0.50 AZOBR_RS10405 membrane protein low > 97
Rahnella sp. WP5 0.27 EX31_RS10210 4-oxalomesaconate tautomerase 0.50 EX31_RS19675 TSUP family transporter low > 89
Klebsiella michiganensis M5al 0.24 BWI76_RS14180 hypothetical protein 0.49 BWI76_RS20425 hypothetical protein — —
Erwinia amylovora T8 0.23 OLJFJH_13345 4-oxalomesaconate tautomerase 0.48 OLJFJH_11165 Sulfite exporter TauE/SafE low > 58
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_0523 Uncharacterized protein conserved in bacteria 0.40 Ga0059261_4150 Predicted permeases low > 68
Sphingobium sp. HT1-2 0.22 GFF2872 4-oxalomesaconate tautomerase (EC 5.3.2.8) 0.34 GFF1911 Transmembrane protein YfcA low > 95
Agrobacterium fabrum C58 0.22 Atu4263 hypothetical protein 0.38 Atu1591 hypothetical protein low > 89
Klebsiella pneumoniae MKP103 0.22 KDGMDA_08375 4-oxalomesaconate tautomerase 0.50 KDGMDA_27260 Sulfite exporter TauE/SafE low > 95
Azospirillum sp. SherDot2 0.22 MPMX19_03556 Putative isomerase YbhH 0.52 MPMX19_00682 putative membrane transporter protein YfcA low > 112
Castellaniella sp019104865 MT123 0.21 ABCV34_RS02795 4-oxalomesaconate tautomerase 0.40 ABCV34_RS12215 TSUP family transporter low > 48
Escherichia coli ECRC62 0.20 BNILDI_21090 ybhH 4-oxalomesaconate tautomerase 0.47 BNILDI_13180 yfcA putative membrane transporter protein YfcA low > 75
Escherichia coli Nissle 1917 0.20 ECOLIN_RS04095 4-oxalomesaconate tautomerase 0.47 ECOLIN_RS13480 sulfite exporter TauE/SafE family protein — —
Escherichia coli BW25113 0.20 b0769 ybhH hypothetical protein (NCBI) 0.47 b2327 yfcA conserved inner membrane protein (NCBI) low > 76
Escherichia fergusonii Becca 0.20 EFB2_03337 Putative isomerase YbhH 0.48 EFB2_01531 putative membrane transporter protein YfcA low > 86
Escherichia coli ECRC98 0.20 JDDGAC_10320 ybhH 4-oxalomesaconate tautomerase 0.47 JDDGAC_26585 yfcA putative membrane transporter protein YfcA low > 87
Escherichia coli ECRC100 0.20 OKFHMN_06665 ybhH 4-oxalomesaconate tautomerase 0.47 OKFHMN_22625 yfcA putative membrane transporter protein YfcA low > 79
Escherichia coli ECRC101 0.20 MCAODC_25885 ybhH 4-oxalomesaconate tautomerase 0.47 MCAODC_13665 yfcA putative membrane transporter protein YfcA low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.20 OHPLBJKB_02944 4-oxalomesaconate tautomerase 0.47 OHPLBJKB_01378 putative membrane transporter protein YfcA low > 74
Escherichia coli ECRC102 0.20 NIAGMN_04715 ybhH 4-oxalomesaconate tautomerase 0.47 NIAGMN_20400 yfcA putative membrane transporter protein YfcA low > 80
Escherichia coli ECOR27 0.20 NOLOHH_23095 ybhH 4-oxalomesaconate tautomerase 0.47 NOLOHH_14260 yfcA putative membrane transporter protein YfcA low > 76
Escherichia coli ECRC99 0.20 KEDOAH_21300 ybhH 4-oxalomesaconate tautomerase 0.47 KEDOAH_05570 yfcA putative membrane transporter protein YfcA — —
Dickeya dadantii 3937 0.19 DDA3937_RS07810 4-oxalomesaconate tautomerase 0.50 DDA3937_RS14570 TSUP family transporter low > 74

Not shown: 47 genomes with orthologs for CSW01_06750 only; 14 genomes with orthologs for CSW01_12070 only