Conservation of cofitness between CSW01_13155 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_13155 ribonuclease R 1.0 CSW01_10020 ROK family protein 0.83 11
Pectobacterium carotovorum WPP14 0.62 HER17_RS03835 ribonuclease R 0.50 HER17_RS10735 ROK family transcriptional regulator 0.75 75
Erwinia amylovora T8 0.62 OLJFJH_02470 ribonuclease R 0.48 OLJFJH_14275 transcriptional regulator low > 58
Escherichia coli ECRC100 0.62 OKFHMN_12220 rnr ribonuclease R 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 79
Escherichia coli ECRC99 0.62 KEDOAH_15935 rnr ribonuclease R 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC102 0.62 NIAGMN_10070 rnr ribonuclease R 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc low > 80
Escherichia coli ECRC101 0.62 MCAODC_02735 rnr ribonuclease R 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc low > 88
Escherichia coli ECRC98 0.62 JDDGAC_15860 rnr ribonuclease R 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc low > 87
Dickeya dianthicola 67-19 0.61 HGI48_RS17315 ribonuclease R 0.49 HGI48_RS10675 ROK family transcriptional regulator low > 71
Escherichia fergusonii Becca 0.61 EFB2_04356 Ribonuclease R 0.47 EFB2_02398 Protein mlc low > 86
Escherichia coli ECRC62 0.61 BNILDI_07005 rnr ribonuclease R 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli Nissle 1917 0.61 ECOLIN_RS24265 ribonuclease R 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.61 OHPLBJKB_03863 Ribonuclease R 0.46 OHPLBJKB_02132 Protein mlc low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.61 GFF832 '3'-to-5' exoribonuclease RNase R' transl_table=11 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon low > 78
Escherichia coli BL21 0.61 ECD_04046 exoribonuclease R, RNase R 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Escherichia coli BW25113 0.61 b4179 vacB putative enzyme (VIMSS) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR27 0.61 NOLOHH_04485 rnr ribonuclease R 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS02575 exoribonuclease R 0.47 BWI76_RS15955 transcriptional regulator low > 92
Rahnella sp. WP5 0.61 EX31_RS08785 ribonuclease R 0.50 EX31_RS16985 ROK family transcriptional regulator low > 89
Escherichia coli ECOR38 0.61 HEPCGN_10450 rnr ribonuclease R 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc low > 88
Klebsiella pneumoniae MKP103 0.61 KDGMDA_11075 ribonuclease R 0.48 KDGMDA_21230 transcriptional regulator low > 95
Dickeya dianthicola ME23 0.61 DZA65_RS18405 ribonuclease R 0.49 DZA65_RS11145 ROK family transcriptional regulator low > 75
Dickeya dadantii 3937 0.61 DDA3937_RS17260 ribonuclease R 0.50 DDA3937_RS10675 ROK family transcriptional regulator low > 74
Erwinia tracheiphila HP pepo 2.2 0.61 IJEDHG_13230 rnr ribonuclease R 0.47 IJEDHG_23280 transcriptional regulator 0.85 8
Erwinia tracheiphila SCR3 0.61 LU632_RS21750 rnr ribonuclease R 0.47 LU632_RS12305 ROK family transcriptional regulator 0.74 25
Enterobacter sp. TBS_079 0.60 MPMX20_00460 Ribonuclease R 0.47 MPMX20_02063 Protein mlc low > 85
Enterobacter asburiae PDN3 0.60 EX28DRAFT_3376 ribonuclease R 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase 0.60 74
Serratia liquefaciens MT49 0.60 IAI46_01660 ribonuclease R 0.50 IAI46_11685 ROK family transcriptional regulator low > 86
Pantoea agglomerans CFBP13505 P0401 0.60 PagCFBP13505_RS11220 ribonuclease R 0.45 PagCFBP13505_RS06405 ROK family transcriptional regulator low > 74
Pantoea sp. MT58 0.60 IAI47_02625 ribonuclease R 0.45 IAI47_09750 ROK family transcriptional regulator 0.39 36
Dyella japonica UNC79MFTsu3.2 0.41 ABZR86_RS08270 ribonuclease R 0.14 ABZR86_RS19180 ROK family transcriptional regulator low > 74
Variovorax sp. OAS795 0.35 ABID97_RS17200 ribonuclease R 0.17 ABID97_RS00440 ROK family protein low > 91
Azospirillum brasilense Sp245 0.24 AZOBR_RS16165 ribonuclease R 0.17 AZOBR_RS27950 transcriptional regulator low > 97
Sinorhizobium meliloti 1021 0.22 SMc01365 exoribonuclease II protein 0.15 SMa2303 ROK family transcriptional regulator low > 103
Phaeobacter inhibens DSM 17395 0.22 PGA1_c36430 putative ribonuclease R 0.19 PGA1_262p00420 Transcriptional regulator/sugar kinase low > 62
Pontibacter actiniarum KMM 6156, DSM 19842 0.21 CA264_17355 ribonuclease R 0.20 CA264_08710 sugar kinase low > 74
Caulobacter crescentus NA1000 Δfur 0.21 CCNA_02537 ribonuclease R 0.09 CCNA_01870 NagC-family transcriptional regulator low > 67
Caulobacter crescentus NA1000 0.21 CCNA_02537 ribonuclease R 0.09 CCNA_01870 NagC-family transcriptional regulator low > 66
Bosea sp. OAE506 0.18 ABIE41_RS18140 ribonuclease R 0.18 ABIE41_RS06840 ROK family protein low > 77

Not shown: 70 genomes with orthologs for CSW01_13155 only; 7 genomes with orthologs for CSW01_10020 only