Conservation of cofitness between CSW01_00590 and CSW01_10020 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00590 oxygen-independent coproporphyrinogen III oxidase 1.0 CSW01_10020 ROK family protein 0.72 3
Dickeya dadantii 3937 0.71 DDA3937_RS00120 oxygen-independent coproporphyrinogen III oxidase 0.50 DDA3937_RS10675 ROK family transcriptional regulator low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.71 GFF2219 Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) 0.47 GFF1785 Mlc, transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon low > 78
Serratia liquefaciens MT49 0.71 IAI46_24970 oxygen-independent coproporphyrinogen III oxidase 0.50 IAI46_11685 ROK family transcriptional regulator low > 86
Klebsiella michiganensis M5al 0.71 BWI76_RS00380 oxygen-independent coproporphyrinogen III oxidase 0.47 BWI76_RS15955 transcriptional regulator 0.27 72
Pectobacterium carotovorum WPP14 0.71 HER17_RS21450 oxygen-independent coproporphyrinogen III oxidase 0.50 HER17_RS10735 ROK family transcriptional regulator low > 75
Enterobacter asburiae PDN3 0.71 EX28DRAFT_4348 oxygen-independent coproporphyrinogen III oxidase 0.48 EX28DRAFT_1493 Transcriptional regulator/sugar kinase low > 76
Enterobacter sp. TBS_079 0.70 MPMX20_04598 Oxygen-independent coproporphyrinogen III oxidase 0.47 MPMX20_02063 Protein mlc low > 85
Escherichia coli ECRC102 0.70 NIAGMN_11875 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 NIAGMN_00335 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli BL21 0.70 ECD_03752 coproporphyrinogen III oxidase, SAM and NAD(P)H dependent, oxygen-independent 0.46 ECD_01563 glucosamine anaerobic growth regulon transcriptional repressor; autorepressor — —
Escherichia coli ECRC98 0.70 JDDGAC_17745 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 JDDGAC_02330 mlc DNA-binding transcriptional repressor Mlc low > 86
Escherichia coli Nissle 1917 0.70 ECOLIN_RS22285 oxygen-independent coproporphyrinogen III oxidase 0.47 ECOLIN_RS08905 sugar metabolism global transcriptional regulator Mlc — —
Escherichia coli ECRC99 0.70 KEDOAH_14030 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 KEDOAH_00365 mlc DNA-binding transcriptional repressor Mlc — —
Escherichia coli ECRC100 0.70 OKFHMN_14120 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 OKFHMN_27740 mlc DNA-binding transcriptional repressor Mlc low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_04186 Oxygen-independent coproporphyrinogen III oxidase 0.46 OHPLBJKB_02132 Protein mlc low > 73
Escherichia coli BW25113 0.70 b3867 hemN O2-independent coproporphyrinogen III oxidase (VIMSS) 0.46 b1594 dgsA DNA-binding transcriptional repressor (NCBI) low > 76
Escherichia coli ECOR27 0.70 NOLOHH_06250 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 NOLOHH_18245 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli ECRC62 0.70 BNILDI_05280 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 BNILDI_17035 mlc DNA-binding transcriptional repressor Mlc low > 75
Escherichia coli ECRC101 0.70 MCAODC_04620 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 MCAODC_17670 mlc DNA-binding transcriptional repressor Mlc low > 87
Dickeya dianthicola ME23 0.70 DZA65_RS22220 oxygen-independent coproporphyrinogen III oxidase 0.49 DZA65_RS11145 ROK family transcriptional regulator low > 75
Escherichia fergusonii Becca 0.70 EFB2_04750 Oxygen-independent coproporphyrinogen III oxidase 0.47 EFB2_02398 Protein mlc low > 86
Escherichia coli ECOR38 0.70 HEPCGN_12755 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 HEPCGN_06115 mlc DNA-binding transcriptional repressor Mlc 0.58 24
Dickeya dianthicola 67-19 0.70 HGI48_RS21245 oxygen-independent coproporphyrinogen III oxidase 0.49 HGI48_RS10675 ROK family transcriptional regulator low > 71
Rahnella sp. WP5 0.69 EX31_RS15885 oxygen-independent coproporphyrinogen III oxidase 0.50 EX31_RS16985 ROK family transcriptional regulator low > 89
Pantoea sp. MT58 0.68 IAI47_00445 oxygen-independent coproporphyrinogen III oxidase 0.45 IAI47_09750 ROK family transcriptional regulator low > 76
Erwinia amylovora T8 0.64 OLJFJH_05490 oxygen-independent coproporphyrinogen III oxidase 0.48 OLJFJH_14275 transcriptional regulator low > 58
Erwinia tracheiphila SCR3 0.63 LU632_RS22115 hemN oxygen-independent coproporphyrinogen III oxidase 0.47 LU632_RS12305 ROK family transcriptional regulator low > 74
Variovorax sp. OAS795 0.45 ABID97_RS16190 oxygen-independent coproporphyrinogen III oxidase 0.17 ABID97_RS00440 ROK family protein low > 91
Dyella japonica UNC79MFTsu3.2 0.45 ABZR86_RS04455 oxygen-independent coproporphyrinogen III oxidase 0.14 ABZR86_RS19180 ROK family transcriptional regulator low > 74
Sinorhizobium meliloti 1021 0.33 SMa1266 coproporphyrinogen III oxidase 0.15 SMa2303 ROK family transcriptional regulator low > 103
Azospirillum brasilense Sp245 0.33 AZOBR_RS03710 coproporphyrinogen III oxidase 0.17 AZOBR_RS27950 transcriptional regulator low > 97
Parabacteroides merdae CL09T00C40 0.33 HMPREF1078_RS13395 oxygen-independent coproporphyrinogen III oxidase 0.19 HMPREF1078_RS06205 ROK family transcriptional regulator low > 61
Bosea sp. OAE506 0.33 ABIE41_RS12085 oxygen-independent coproporphyrinogen III oxidase 0.18 ABIE41_RS06840 ROK family protein low > 77
Pontibacter actiniarum KMM 6156, DSM 19842 0.31 CA264_03125 oxygen-independent coproporphyrinogen III oxidase 0.20 CA264_08710 sugar kinase low > 74
Phaeobacter inhibens DSM 17395 0.29 PGA1_c00360 oxygen-independent coproporphyrinogen III oxidase HemN 0.19 PGA1_262p00420 Transcriptional regulator/sugar kinase low > 62
Caulobacter crescentus NA1000 0.28 CCNA_01477 oxygen-independent coproporphyrinogen-III oxidase hemN 0.09 CCNA_01870 NagC-family transcriptional regulator low > 66
Caulobacter crescentus NA1000 Δfur 0.28 CCNA_01477 oxygen-independent coproporphyrinogen-III oxidase hemN 0.09 CCNA_01870 NagC-family transcriptional regulator low > 67

Not shown: 61 genomes with orthologs for CSW01_00590 only; 6 genomes with orthologs for CSW01_10020 only