| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
| Vibrio cholerae E7946 ATCC 55056 | 1.0 | CSW01_07230 | | cytochrome-c oxidase, cbb3-type subunit I | 1.0 | CSW01_09520 | | disulfide bond formation protein B | 0.42 | 14 |
| Shewanella amazonensis SB2B | 0.88 | Sama_1791 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.43 | Sama_1926 | | disulfide bond formation protein B (RefSeq) | low | > 62 |
| Shewanella oneidensis MR-1 | 0.87 | SO2364 | ccoN | cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) | 0.43 | SO2887 | dsbB | disulfide bond formation protein b (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.87 | Shewana3_2107 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.43 | Shewana3_1633 | | disulfide bond formation protein B (RefSeq) | low | > 73 |
| Shewanella loihica PV-4 | 0.86 | Shew_1985 | | cytochrome c oxidase, cbb3-type, subunit I (RefSeq) | 0.45 | Shew_2176 | | disulphide bond formation protein DsbB (RefSeq) | low | > 60 |
| Alteromonas macleodii MIT1002 | 0.82 | MIT1002_02129 | | hypothetical protein | 0.38 | MIT1002_02581 | | Disulfide oxidoreductase | low | > 70 |
| Pseudomonas aeruginosa MRSN321 | 0.80 | DY961_RS19425 | ccoN;go_function=cytochrome-c | cytochrome-c oxidase cbb3-type subunit I | 0.26 | DY961_RS22710 | | disulfide bond formation protein B | low | > 100 |
| Pseudomonas aeruginosa PUPa3 | 0.80 | DQ20_RS53550 | ccoN;go_function=cytochrome-c | cytochrome-c oxidase cbb3-type subunit I | 0.26 | DQ20_RS36630 | | disulfide bond formation protein B | low | > 101 |
| Pseudomonas aeruginosa PA14 | 0.80 | IKLFDK_07450 | | cytochrome-c oxidase cbb3-type subunit I | 0.26 | IKLFDK_22735 | | Disulfide bond formation protein DsbB | low | > 98 |
| Pseudomonas sp. SVBP6 | 0.79 | COO64_RS18710 | ccoN | cytochrome-c oxidase, cbb3-type subunit I | 0.14 | COO64_RS03670 | | disulfide bond formation protein B | low | > 93 |
| Pseudomonas stutzeri RCH2 | 0.78 | Psest_2527 | | cytochrome c oxidase, cbb3-type, subunit I | 0.16 | Psest_3744 | | Disulfide bond formation protein DsbB | low | > 67 |
| Cupriavidus basilensis FW507-4G11 | 0.77 | RR42_RS12910 | | cbb3-type cytochrome c oxidase subunit I | 0.18 | RR42_RS12015 | | dihydrolipoamide acyltransferase | low | > 128 |
| Pseudomonas segetis P6 | 0.77 | MPMX49_02314 | | Cbb3-type cytochrome c oxidase subunit CcoN1 | 0.14 | MPMX49_04517 | | Disulfide bond formation protein B | — | — |
| Ralstonia solanacearum IBSBF1503 | 0.77 | RALBFv3_RS15615 | | cytochrome-c oxidase, cbb3-type subunit I | 0.17 | RALBFv3_RS00215 | | disulfide bond formation protein B | low | > 76 |
| Ralstonia solanacearum UW163 | 0.77 | UW163_RS13075 | | cytochrome-c oxidase, cbb3-type subunit I | 0.17 | UW163_RS13545 | | disulfide bond formation protein B | — | — |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS06395 | | cytochrome-c oxidase, cbb3-type subunit I | 0.17 | RS_RS06885 | | disulfide bond formation protein B | — | — |
| Ralstonia solanacearum PSI07 | 0.77 | RPSI07_RS17740 | | cytochrome-c oxidase, cbb3-type subunit I | 0.17 | RPSI07_RS17265 | | disulfide bond formation protein B | — | — |
| Variovorax sp. OAS795 | 0.74 | ABID97_RS16225 | | cytochrome-c oxidase, cbb3-type subunit I | 0.17 | ABID97_RS15590 | | disulfide bond formation protein B | low | > 91 |
| Acidovorax sp. GW101-3H11 | 0.73 | Ac3H11_968 | | Cytochrome c oxidase subunit CcoN (EC 1.9.3.1) | 0.19 | Ac3H11_908 | | Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation | — | — |
| Variovorax sp. SCN45 | 0.71 | GFF6964 | | Cytochrome c oxidase (cbb3-type) subunit CcoN (EC 1.9.3.1) | 0.16 | GFF1291 | | Periplasmic thiol:disulfide oxidoreductase DsbB, required for DsbA reoxidation | — | — |
| Dyella japonica UNC79MFTsu3.2 | 0.65 | ABZR86_RS04450 | | cytochrome-c oxidase, cbb3-type subunit I | 0.14 | ABZR86_RS21775 | | disulfide bond formation protein B | — | — |
Not shown: 46 genomes with orthologs for CSW01_07230 only; 33 genomes with orthologs for CSW01_09520 only