Conservation of cofitness between CSW01_00205 and CSW01_08525 in Vibrio cholerae E7946 ATCC 55056

39 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00205 hemolysin III family protein 1.0 CSW01_08525 formate transporter FocA 0.63 1
Klebsiella michiganensis M5al 0.76 BWI76_RS23840 hemolysin III family protein 0.56 BWI76_RS09740 formate transporter FocA low > 92
Enterobacter sp. TBS_079 0.76 MPMX20_03758 hypothetical protein 0.54 MPMX20_01563 putative formate transporter 1 low > 85
Klebsiella pneumoniae MKP103 0.76 KDGMDA_04325 hemolysin III family protein 0.57 KDGMDA_17950 formate transporter FocA low > 95
Dickeya dadantii 3937 0.74 DDA3937_RS03270 hemolysin III family protein 0.55 DDA3937_RS09660 formate transporter FocA low > 74
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF2997 COG1272: Predicted membrane protein hemolysin III homolog 0.54 GFF3661 Formate efflux transporter (TC 2.A.44 family) low > 78
Escherichia coli Nissle 1917 0.73 ECOLIN_RS16150 hemolysin III family protein 0.56 ECOLIN_RS04790 formate transporter FocA low > 55
Escherichia coli ECOR27 0.73 NOLOHH_11465 yqfA hemolysin III family protein 0.56 NOLOHH_22065 focA formate transporter FocA low > 76
Escherichia coli ECRC99 0.73 KEDOAH_08595 yqfA hemolysin III family protein 0.56 KEDOAH_22230 focA formate transporter FocA — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.73 OHPLBJKB_00816 hypothetical protein 0.56 OHPLBJKB_02764 putative formate transporter 1 low > 74
Escherichia coli ECRC98 0.73 JDDGAC_23185 yqfA hemolysin III family protein 0.56 JDDGAC_09115 focA formate transporter FocA low > 87
Escherichia coli ECRC62 0.73 BNILDI_10000 yqfA hemolysin III family protein 0.56 BNILDI_20320 focA formate transporter FocA low > 75
Escherichia coli BW25113 0.73 b2899 yqfA predicted oxidoreductase, inner membrane subunit (NCBI) 0.56 b0904 focA formate transporter (NCBI) low > 76
Escherichia coli ECRC102 0.73 NIAGMN_17310 yqfA hemolysin III family protein 0.56 NIAGMN_03225 focA formate transporter FocA low > 80
Escherichia coli ECRC100 0.73 OKFHMN_19545 yqfA hemolysin III family protein 0.56 OKFHMN_05505 focA formate transporter FocA low > 79
Escherichia coli BL21 0.73 ECD_02731 hemolysin III family HylIII inner membrane protein 0.56 ECD_00908 formate channel low > 61
Escherichia coli ECRC101 0.73 MCAODC_10065 yqfA hemolysin III family protein 0.56 MCAODC_24895 focA formate transporter FocA low > 87
Serratia liquefaciens MT49 0.72 IAI46_20775 hemolysin III family protein 0.54 IAI46_08615 formate transporter FocA low > 87
Pantoea agglomerans CFBP13505 P0401 0.69 PagCFBP13505_RS15905 hemolysin III family protein 0.56 PagCFBP13505_RS04455 formate transporter FocA low > 74
Rahnella sp. WP5 0.69 EX31_RS21610 hemolysin III family protein 0.55 EX31_RS18265 formate transporter FocA low > 89
Dickeya dianthicola 67-19 0.68 HGI48_RS03410 hemolysin III family protein 0.53 HGI48_RS09670 formate transporter FocA low > 71
Pantoea sp. MT58 0.67 IAI47_03795 hemolysin III family protein 0.52 IAI47_12875 formate transporter FocA low > 76
Dickeya dianthicola ME23 0.67 DZA65_RS03455 hemolysin III family protein 0.53 DZA65_RS09980 formate transporter FocA low > 75
Pectobacterium carotovorum WPP14 0.64 HER17_RS17935 hemolysin III family protein 0.52 HER17_RS12300 formate transporter FocA low > 75
Alteromonas macleodii MIT1002 0.52 MIT1002_00886 hemolysin 0.16 MIT1002_01529 Formate channel 1 low > 70
Marinobacter adhaerens HP15 0.44 HP15_2974 channel protein, hemolysin III family 0.14 HP15_3885 formate and nitrite transporter low > 73
Acinetobacter baumannii LAC-4 0.42 RR41_RS03190 hemolysin III family protein 0.09 RR41_RS00280 formate/nitrite transporter family protein low > 55
Variovorax sp. OAS795 0.36 ABID97_RS07605 hemolysin III family protein 0.14 ABID97_RS16035 formate/nitrite transporter family protein low > 91
Pseudomonas sp. SVBP6 0.35 COO64_RS13640 hemolysin III family protein 0.11 COO64_RS17220 formate/nitrite transporter family protein low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.35 Psyr_0452 HylII 0.25 Psyr_4660 Formate/nitrite transporter low > 86
Pseudomonas syringae pv. syringae B728a 0.35 Psyr_0452 HylII 0.25 Psyr_4660 Formate/nitrite transporter low > 86
Pseudomonas sp. RS175 0.35 PFR28_04213 hypothetical protein 0.11 PFR28_04199 Inner membrane protein YfdC low > 88
Pseudomonas fluorescens FW300-N2C3 0.35 AO356_13560 hemolysin III 0.10 AO356_13620 hypothetical protein low > 104
Pseudomonas sp. S08-1 0.34 OH686_06045 Predicted membrane protein, hemolysin III-related 0.15 OH686_20565 Nitrite transporter from formate/nitrite family low > 80
Pseudomonas sp. DMC3 0.34 GFF181 hypothetical protein 0.11 GFF168 Inner membrane protein YfdC low > 89
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_2371 COG1272: Predicted membrane protein hemolysin III homolog 0.09 Pf1N1B4_2387 Putative transport low > 87
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1038 COG1272: Predicted membrane protein hemolysin III homolog 0.10 PfGW456L13_1053 Putative transport low > 87
Pseudomonas stutzeri RCH2 0.32 Psest_3779 channel protein, hemolysin III family 0.14 Psest_2408 Formate/nitrite family of transporters low > 67
Rhodospirillum rubrum S1H 0.30 Rru_A0661 Hly-III related proteins (NCBI) 0.33 Rru_A0311 Formate/nitrite transporter (NCBI) low > 58
Fusobacterium nucleatum SB010 0.24 HUW76_01725 hemolysin III family protein 0.22 HUW76_06065 formate/nitrite transporter family protein low > 35

Not shown: 54 genomes with orthologs for CSW01_00205 only; 9 genomes with orthologs for CSW01_08525 only