Conservation of cofitness between CSW01_02445 and CSW01_03310 in Vibrio cholerae E7946 ATCC 55056

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02445 hypothetical protein 1.0 CSW01_03310 peptidase M23 0.53 1
Alteromonas macleodii MIT1002 0.56 MIT1002_03063 YGGT family protein 0.44 MIT1002_03152 Glycyl-glycine endopeptidase ALE-1 precursor — —
Shewanella oneidensis MR-1 0.55 SO3355 conserved hypothetical protein (NCBI ptt file) 0.45 SO1314 peptidase, M23/M37 family (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.54 Sama_2479 protein of unknown function YGGT (RefSeq) 0.44 Sama_0849 M24/M37 family peptidase (RefSeq) — —
Shewanella sp. ANA-3 0.51 Shewana3_1192 protein of unknown function YGGT (RefSeq) 0.45 Shewana3_3059 peptidase M23B (RefSeq) low > 73
Pseudomonas stutzeri RCH2 0.37 Psest_0282 Predicted integral membrane protein 0.32 Psest_3636 Membrane proteins related to metalloendopeptidases — —
Pseudomonas orientalis W4I3 0.35 QF045_RS01135 YggT family protein 0.30 QF045_RS00035 peptidoglycan DD-metalloendopeptidase family protein low > 93
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_08170 hypothetical protein 0.30 AO353_07140 peptidase M23 low > 101
Pseudomonas sp. S08-1 0.35 OH686_10985 YggT-like protein 0.31 OH686_15210 Peptidase, M23/M37 family — —
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_0475 Protein of unknown function YGGT 0.30 Psyr_4566 Peptidase M23B low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_0475 Protein of unknown function YGGT 0.30 Psyr_4566 Peptidase M23B — —
Pseudomonas sp. SVBP6 0.34 COO64_RS12990 YggT family protein 0.31 COO64_RS22335 peptidoglycan DD-metalloendopeptidase family protein low > 91
Pseudomonas aeruginosa PUPa3 0.34 DQ20_RS37360 YggT family protein 0.33 DQ20_RS36085 peptidoglycan DD-metalloendopeptidase family protein low > 101
Pseudomonas sp. BP01 0.33 JOY50_RS20900 YggT family protein 0.32 JOY50_RS18305 peptidoglycan DD-metalloendopeptidase family protein low > 84
Pseudomonas aeruginosa MRSN321 0.33 DY961_RS21940 YggT family protein 0.33 DY961_RS23280 peptidoglycan DD-metalloendopeptidase family protein low > 99
Pseudomonas putida KT2440 0.33 PP_5096 putative factor involved in shape determination 0.31 PP_0435 Peptidase, M23/M37 family 0.17 55
Pseudomonas lactucae CFBP13502 0.33 GEMAOFIL_05484 hypothetical protein 0.31 GEMAOFIL_05249 Murein DD-endopeptidase MepM low > 96
Pseudomonas protegens RBAN4 0.32 FABNJH_29435 yggT YggT family protein 0.31 FABNJH_28240 yebA Metalloprotease YebA — —
Pseudomonas segetis P6 0.32 ACVTMO_RS03010 YggT family protein 0.31 ACVTMO_RS04500 OapA family protein low > 75
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_13415 hypothetical protein 0.31 AO356_14505 peptidase M23 low > 104
Pseudomonas simiae WCS417 0.32 PS417_26735 membrane protein 0.30 PS417_25645 peptidase M23 — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4599 Integral membrane protein YggT, involved in response to extracytoplasmic stress (osmotic shock) 0.31 Pf6N2E2_4839 Cell wall endopeptidase, family M23/M37 — —
Pseudomonas sp. RS175 0.31 PFR28_04244 hypothetical protein 0.31 PFR28_04030 hypothetical protein 0.34 21
Marinobacter adhaerens HP15 0.31 HP15_286 protein of unknown function YGGT 0.29 HP15_357 peptidase M23B — —
Pseudomonas fluorescens SBW25 0.31 PFLU_RS28380 YggT family protein 0.30 PFLU_RS27300 peptidoglycan DD-metalloendopeptidase family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.31 PFLU_RS28380 YggT family protein 0.30 PFLU_RS27300 peptidoglycan DD-metalloendopeptidase family protein low > 109

Not shown: 46 genomes with orthologs for CSW01_02445 only; 5 genomes with orthologs for CSW01_03310 only