Conservation of cofitness between CSW01_06560 and CSW01_02475 in Vibrio cholerae E7946 ATCC 55056

41 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_06560 6-carboxytetrahydropterin synthase QueD 1.0 CSW01_02475 tyrosine--tRNA ligase 0.60 3
Erwinia amylovora T8 0.86 OLJFJH_09295 6-carboxytetrahydropterin synthase QueD 0.55 OLJFJH_14430 tyrosine--tRNA ligase — —
Klebsiella pneumoniae MRSN742743 0.85 GJGHJB_00982 queD 6-carboxytetrahydropterin synthase QueD 0.56 GJGHJB_02206 tyrS tyrosine--tRNA ligase — —
Enterobacter asburiae PDN3 0.85 EX28DRAFT_2854 queuosine biosynthesis protein QueD 0.55 EX28DRAFT_1633 tyrosyl-tRNA synthetase (EC 6.1.1.1) — —
Enterobacter sp. TBS_079 0.85 MPMX20_03644 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.55 MPMX20_02001 Tyrosine--tRNA ligase — —
Klebsiella pneumoniae MKP103 0.85 KDGMDA_03305 6-carboxytetrahydropterin synthase QueD 0.55 KDGMDA_23350 tyrosine--tRNA ligase — —
Escherichia coli ECOR38 0.85 HEPCGN_19100 queD 6-carboxytetrahydropterin synthase QueD 0.56 HEPCGN_05885 tyrS tyrosine--tRNA ligase — —
Pantoea agglomerans CFBP13505 P0401 0.85 PagCFBP13516_RS04415 queD 6-carboxytetrahydropterin synthase QueD 0.55 PagCFBP13516_RS10685 tyrS tyrosine--tRNA ligase — —
Klebsiella michiganensis M5al 0.85 BWI76_RS22775 6-carboxytetrahydropterin synthase QueD 0.56 BWI76_RS16405 tyrosine--tRNA ligase — —
Pantoea sp. MT58 0.84 IAI47_04145 6-carboxytetrahydropterin synthase QueD 0.55 IAI47_10515 tyrosine--tRNA ligase — —
Dickeya dianthicola 67-19 0.84 HGI48_RS17030 6-carboxytetrahydropterin synthase QueD 0.54 HGI48_RS12625 tyrosine--tRNA ligase — —
Escherichia coli ECRC62 0.84 BNILDI_10730 queD 6-carboxytetrahydropterin synthase QueD 0.56 BNILDI_16810 tyrS tyrosine--tRNA ligase — —
Escherichia coli ECRC101 0.84 MCAODC_10890 queD 6-carboxytetrahydropterin synthase QueD 0.56 MCAODC_17910 tyrS tyrosine--tRNA ligase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.84 OHPLBJKB_00968 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.56 OHPLBJKB_02088 Tyrosine--tRNA ligase — —
Escherichia coli ECRC99 0.84 KEDOAH_07760 queD 6-carboxytetrahydropterin synthase QueD 0.56 KEDOAH_00605 tyrS tyrosine--tRNA ligase — —
Escherichia coli BW25113 0.84 b2765 ygcM 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) (NCBI) 0.56 b1637 tyrS tyrosyl-tRNA synthetase (NCBI) — —
Escherichia coli ECOR27 0.84 NOLOHH_12180 queD 6-carboxytetrahydropterin synthase QueD 0.56 NOLOHH_18020 tyrS tyrosine--tRNA ligase — —
Escherichia coli BL21 0.84 ECD_02610 6-pyruvoyl tetrahydrobiopterin synthase (PTPS) 0.56 ECD_01607 tyrosyl-tRNA synthetase — —
Escherichia coli ECRC98 0.84 JDDGAC_24030 queD 6-carboxytetrahydropterin synthase QueD 0.56 JDDGAC_02090 tyrS tyrosine--tRNA ligase — —
Escherichia fergusonii Becca 0.84 EFB2_01152 6-carboxy-5,6,7,8-tetrahydropterin synthase 0.56 EFB2_02355 Tyrosine--tRNA ligase — —
Escherichia coli ECRC100 0.84 OKFHMN_20365 queD 6-carboxytetrahydropterin synthase QueD 0.56 OKFHMN_27500 tyrS tyrosine--tRNA ligase — —
Escherichia coli ECRC102 0.84 NIAGMN_18135 queD 6-carboxytetrahydropterin synthase QueD 0.56 NIAGMN_00565 tyrS tyrosine--tRNA ligase — —
Erwinia tracheiphila SCR3 0.83 LU632_RS06395 queD 6-carboxytetrahydropterin synthase QueD 0.54 LU632_RS11260 tyrS tyrosine--tRNA ligase — —
Erwinia tracheiphila HP pepo 2.2 0.83 IJEDHG_17415 queD 6-carboxytetrahydropterin synthase QueD 0.54 IJEDHG_25105 tyrS tyrosine--tRNA ligase — —
Escherichia coli Nissle 1917 0.83 ECOLIN_RS15415 6-carboxytetrahydropterin synthase QueD 0.56 ECOLIN_RS09135 tyrosine--tRNA ligase — —
Dickeya dadantii 3937 0.83 DDA3937_RS16965 6-carboxytetrahydropterin synthase QueD 0.54 DDA3937_RS12570 tyrosine--tRNA ligase — —
Dickeya dianthicola ME23 0.83 DZA65_RS18105 6-carboxytetrahydropterin synthase QueD 0.54 DZA65_RS13080 tyrosine--tRNA ligase — —
Rahnella sp. WP5 0.81 EX31_RS07915 6-carboxytetrahydropterin synthase QueD 0.54 EX31_RS13750 tyrosine--tRNA ligase — —
Pectobacterium carotovorum WPP14 0.80 HER17_RS04205 6-carboxytetrahydropterin synthase QueD 0.55 HER17_RS09295 tyrosine--tRNA ligase — —
Serratia liquefaciens MT49 0.79 IAI46_03680 6-carboxytetrahydropterin synthase QueD 0.53 IAI46_11365 tyrosine--tRNA ligase — —
Pseudomonas aeruginosa PUPa3 0.76 NPBIFN_02391 queD 6-carboxytetrahydropterin synthase QueD 0.31 NPBIFN_00819 tyrS tyrosine--tRNA ligase low > 101
Xanthobacter sp. DMC5 0.53 GFF3475 hypothetical protein 0.31 GFF1049 Tyrosine--tRNA ligase — —
Rhodopseudomonas palustris CGA009 0.52 TX73_008525 6-carboxytetrahydropterin synthase QueD 0.30 TX73_012720 tyrosine--tRNA ligase — —
Agrobacterium fabrum C58 0.34 Atu3345 6-pyruvoyl tetrahydrobiopterin synthase 0.33 Atu1828 tyrosyl-tRNA synthetase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.33 A4249_RS08690 6-carboxytetrahydropterin synthase 0.28 A4249_RS04520 tyrosine--tRNA ligase — —
Caulobacter crescentus NA1000 0.32 CCNA_03260 queuosine biosynthesis protein QueD 0.31 CCNA_01946 tyrosyl-tRNA synthetase — —
Sinorhizobium meliloti 1021 0.32 SM_b20939 6-pyruvoyl-tetrahydropterin synthase 0.33 SMc00526 tyrosyl-tRNA synthetase — —
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_03260 queuosine biosynthesis protein QueD 0.31 CCNA_01946 tyrosyl-tRNA synthetase — —
Phaeobacter inhibens DSM 17395 0.27 PGA1_c05610 putative queuosine biosynthesis protein QueD 0.34 PGA1_c11340 tyrosyl-tRNA synthetase TyrS — —
Phocaeicola dorei CL03T12C01 0.27 ABI39_RS10595 6-carboxytetrahydropterin synthase QueD 0.36 ABI39_RS05520 tyrosine--tRNA ligase — —
Phocaeicola vulgatus CL09T03C04 0.26 HMPREF1058_RS14875 6-carboxytetrahydropterin synthase QueD 0.36 HMPREF1058_RS11405 tyrosine--tRNA ligase — —
Bacteroides stercoris CC31F 0.25 HMPREF1181_RS13890 6-carboxytetrahydropterin synthase QueD 0.37 HMPREF1181_RS01640 tyrosine--tRNA ligase — —

Not shown: 38 genomes with orthologs for CSW01_06560 only; 21 genomes with orthologs for CSW01_02475 only