Conservation of cofitness between CSW01_00655 and CSW01_00685 in Vibrio cholerae E7946 ATCC 55056

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00655 2-haloalkanoic acid dehalogenase 1.0 CSW01_00685 lysophospholipase 0.66 4
Erwinia tracheiphila SCR3 0.45 LU632_RS24130 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 LU632_RS24080 pldB lysophospholipase L2 low > 74
Klebsiella michiganensis M5al 0.45 BWI76_RS01215 flavin mononucleotide phosphatase 0.30 BWI76_RS01260 lysophospholipase L2 — —
Erwinia tracheiphila HP pepo 2.2 0.45 IJEDHG_08775 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.31 IJEDHG_08720 pldB lysophospholipase L2 low > 61
Erwinia amylovora T8 0.44 OLJFJH_06420 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.32 OLJFJH_06455 lysophospholipase L2 low > 58
Pantoea sp. MT58 0.43 IAI47_18395 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.31 IAI47_18340 lysophospholipase L2 low > 76
Enterobacter asburiae PDN3 0.43 EX28DRAFT_4481 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 0.27 EX28DRAFT_4490 Lysophospholipase low > 76
Serratia liquefaciens MT49 0.43 IAI46_00730 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 IAI46_00785 lysophospholipase L2 low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.43 GFF240 'Putative FMN hydrolase (EC 3.1.3.-); 5-Amino-6-(5'-phosphoribitylamino)uracil phosphatase' transl_table=11 0.29 GFF251 Lysophospholipase L2 (EC 3.1.1.5) low > 78
Klebsiella pneumoniae MKP103 0.43 KDGMDA_09705 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.29 KDGMDA_09755 lysophospholipase L2 low > 95
Pantoea agglomerans CFBP13505 P0401 0.42 PagCFBP13505_RS15375 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.31 PagCFBP13505_RS15320 lysophospholipase L2 low > 74
Enterobacter sp. TBS_079 0.42 MPMX20_04464 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.28 MPMX20_04455 Lysophospholipase L2 low > 85
Escherichia coli ECRC101 0.42 MCAODC_04920 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 MCAODC_04850 pldB lysophospholipase L2 low > 88
Escherichia coli ECRC98 0.42 JDDGAC_18040 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 JDDGAC_17970 pldB lysophospholipase L2 low > 87
Escherichia coli ECRC102 0.42 NIAGMN_12170 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 NIAGMN_12100 pldB lysophospholipase L2 low > 80
Escherichia coli ECRC100 0.42 OKFHMN_14415 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 OKFHMN_14345 pldB lysophospholipase L2 low > 79
Escherichia coli ECRC99 0.42 KEDOAH_13735 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 KEDOAH_13805 pldB lysophospholipase L2 — —
Escherichia coli Nissle 1917 0.42 ECOLIN_RS21880 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 ECOLIN_RS21960 lysophospholipase L2 — —
Escherichia coli BL21 0.42 ECD_03688 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase; pyrimidine phosphatase; riboflavin synthesis 0.30 ECD_03704 lysophospholipase L2 low > 61
Escherichia coli ECRC62 0.42 BNILDI_04990 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 BNILDI_05055 pldB lysophospholipase L2 low > 75
Escherichia coli ECOR38 0.42 HEPCGN_13120 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 HEPCGN_13045 pldB lysophospholipase L2 low > 88
Escherichia coli ECOR27 0.42 NOLOHH_06545 yigB 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 NOLOHH_06475 pldB lysophospholipase L2 low > 76
Escherichia fergusonii Becca 0.42 EFB2_04825 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 EFB2_04812 Lysophospholipase L2 low > 86
Pectobacterium carotovorum WPP14 0.42 HER17_RS01355 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.32 HER17_RS01410 lysophospholipase L2 low > 75
Escherichia coli BW25113 0.42 b3812 yigB predicted hydrolase (NCBI) 0.30 b3825 pldB lysophospholipase L(2) (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.42 OHPLBJKB_04238 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 OHPLBJKB_04226 Lysophospholipase L2 low > 74
Rahnella sp. WP5 0.39 EX31_RS15170 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 EX31_RS15225 lysophospholipase L2 low > 89
Dickeya dianthicola ME23 0.37 DZA65_RS21085 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.29 DZA65_RS21030 lysophospholipase L2 low > 75
Dickeya dianthicola 67-19 0.37 HGI48_RS20040 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.29 HGI48_RS19985 lysophospholipase L2 low > 71
Dickeya dadantii 3937 0.36 DDA3937_RS19885 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase YigB 0.30 DDA3937_RS19830 lysophospholipase L2 low > 74
Shewanella loihica PV-4 0.35 Shew_0326 HAD family hydrolase (RefSeq) 0.33 Shew_3723 alpha/beta hydrolase fold (RefSeq) low > 60
Shewanella oneidensis MR-1 0.32 SO4305 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (NCBI ptt file) 0.32 SO4733 lypA lysophospholipase L2 (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.32 Sama_3246 HAD-superfamily hydrolase, subfamily IA, variant 1 family protein (RefSeq) 0.31 Sama_0083 alpha/beta hydrolase fold (RefSeq) low > 62
Shewanella sp. ANA-3 0.31 Shewana3_0394 HAD family hydrolase (RefSeq) 0.33 Shewana3_4119 alpha/beta hydrolase fold (RefSeq) low > 73
Alteromonas macleodii MIT1002 0.28 MIT1002_00156 Flavin mononucleotide phosphatase YigB 0.23 MIT1002_00479 lysophospholipase L2 low > 70
Herbaspirillum seropedicae SmR1 0.20 HSERO_RS03050 hydrolase 0.09 HSERO_RS16170 lysophospholipase low > 78

Not shown: 31 genomes with orthologs for CSW01_00655 only; 11 genomes with orthologs for CSW01_00685 only