Conservation of cofitness between CSW01_02525 and CSW01_00650 in Vibrio cholerae E7946 ATCC 55056

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_02525 iron-regulated outer membrane virulence protein 1.0 CSW01_00650 tyrosine recombinase XerC 0.65 6
Shewanella oneidensis MR-1 0.51 SO_4523 irgA enterobactin receptor protein (RefSeq) 0.47 SO4306 xerC integrase/recombinase XerC (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.50 Shewana3_3929 enterobactin receptor protein (RefSeq) 0.47 Shewana3_0393 tyrosine recombinase XerC (RefSeq) low > 73
Pseudomonas sp. SVBP6 0.45 COO64_RS11375 ligand-gated channel protein 0.39 COO64_RS01270 xerC tyrosine recombinase XerC low > 93
Serratia liquefaciens MT49 0.40 IAI46_17185 ligand-gated channel protein 0.55 IAI46_00725 tyrosine recombinase XerC low > 86
Enterobacter sp. TBS_079 0.39 MPMX20_03126 Colicin I receptor 0.52 MPMX20_04465 Tyrosine recombinase XerC low > 85
Agrobacterium fabrum C58 0.33 Atu3916 exogenous ferric siderophore receptor 0.24 Atu2628 site-specific recombinase — —
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_872 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins 0.38 Pf6N2E2_4416 Tyrosine recombinase XerC low > 103
Pseudomonas fluorescens FW300-N2C3 0.32 AO356_27385 ligand-gated channel protein 0.38 AO356_12725 recombinase XerC low > 104
Pseudomonas fluorescens SBW25-INTG 0.32 PFLU_RS17765 TonB-dependent receptor 0.34 PFLU_RS29280 tyrosine recombinase XerC low > 109
Pseudomonas fluorescens SBW25 0.32 PFLU_RS17765 TonB-dependent receptor 0.34 PFLU_RS29280 tyrosine recombinase XerC low > 109
Escherichia fergusonii Becca 0.30 EFB2_04431 Colicin I receptor 0.54 EFB2_04826 Tyrosine recombinase XerC low > 86
Escherichia coli ECOR38 0.30 HEPCGN_11000 ireA TonB-dependent siderophore receptor IreA 0.54 HEPCGN_13125 xerC tyrosine recombinase XerC low > 87
Erwinia tracheiphila SCR3 0.28 LU632_RS00250 cirA catecholate siderophore receptor CirA 0.53 LU632_RS24135 xerC tyrosine recombinase XerC — —
Pantoea sp. MT58 0.28 IAI47_04670 catecholate siderophore receptor CirA 0.53 IAI47_18400 tyrosine recombinase XerC low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.28 GFF3779 Colicin I receptor precursor 0.55 GFF239 Tyrosine recombinase XerC — —
Enterobacter asburiae PDN3 0.27 EX28DRAFT_0401 Outer membrane receptor for ferrienterochelin and colicins 0.54 EX28DRAFT_4480 tyrosine recombinase XerC — —
Escherichia coli ECRC101 0.27 MCAODC_23465 iha bifunctional siderophore receptor/adhesin Iha 0.55 MCAODC_04925 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC98 0.27 JDDGAC_07705 iha bifunctional siderophore receptor/adhesin Iha 0.55 JDDGAC_18045 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC99 0.27 KEDOAH_23655 iha bifunctional siderophore receptor/adhesin Iha 0.55 KEDOAH_13730 xerC tyrosine recombinase XerC — —
Escherichia coli ECRC100 0.27 OKFHMN_04115 iha bifunctional siderophore receptor/adhesin Iha 0.55 OKFHMN_14420 xerC tyrosine recombinase XerC low > 80
Escherichia coli ECRC102 0.27 NIAGMN_03545 iha bifunctional siderophore receptor/adhesin Iha 0.55 NIAGMN_12175 xerC tyrosine recombinase XerC — —
Escherichia coli Nissle 1917 0.27 ECOLIN_RS16645 bifunctional siderophore receptor/adhesin Iha 0.54 ECOLIN_RS21875 tyrosine recombinase XerC low > 55
Pectobacterium carotovorum WPP14 0.27 HER17_RS12830 TonB-dependent receptor 0.54 HER17_RS01350 tyrosine recombinase XerC low > 75
Escherichia coli BL21 0.27 ECD_02084 colicin IA outer membrane receptor and translocator; ferric iron-catecholate transporter 0.55 ECD_03687 site-specific tyrosine recombinase low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.27 OHPLBJKB_01556 Colicin I receptor 0.54 OHPLBJKB_04239 Tyrosine recombinase XerC low > 73
Escherichia coli BW25113 0.27 b2155 cirA ferric iron-catecholate outer membrane transporter (NCBI) 0.54 b3811 xerC site-specific tyrosine recombinase XerC (NCBI) low > 76
Klebsiella michiganensis M5al 0.27 BWI76_RS19680 catecholate siderophore receptor CirA 0.55 BWI76_RS01210 tyrosine recombinase XerC low > 92
Pseudomonas stutzeri RCH2 0.27 Psest_3341 Outer membrane receptor for ferrienterochelin and colicins 0.40 Psest_3767 tyrosine recombinase XerC low > 67
Escherichia coli ECRC62 0.27 BNILDI_14000 cirA catecholate siderophore receptor CirA 0.54 BNILDI_04985 xerC tyrosine recombinase XerC low > 75
Escherichia coli ECOR27 0.27 NOLOHH_15080 cirA catecholate siderophore receptor CirA 0.54 NOLOHH_06550 xerC tyrosine recombinase XerC low > 75
Hydrogenophaga sp. GW460-11-11-14-LB1 0.24 GFF3912 TonB-dependent receptor; Outer membrane receptor for ferrienterochelin and colicins 0.31 GFF547 Tyrosine recombinase XerC low > 90
Alteromonas macleodii MIT1002 0.21 MIT1002_00918 Colicin I receptor precursor 0.45 MIT1002_00157 Tyrosine recombinase XerC low > 70
Pseudomonas aeruginosa PA14 0.21 IKLFDK_09395 TonB-dependent receptor 0.40 IKLFDK_27050 tyrosine recombinase XerC low > 101
Azospirillum brasilense Sp245 0.18 AZOBR_RS29530 TonB-dependent receptor 0.23 AZOBR_RS03965 tyrosine recombinase XerC — —
Dickeya dadantii 3937 0.17 DDA3937_RS17895 TonB-dependent siderophore receptor 0.56 DDA3937_RS19890 tyrosine recombinase XerC — —
Pseudomonas putida KT2440 0.17 PP_2242 ferric enterobactin transport system outer membrane subunit 0.39 PP_5230 Tyrosine recombinase XerC low > 96
Pseudomonas sp. BP01 0.16 JOY50_RS25375 TonB-dependent siderophore receptor 0.39 JOY50_RS22610 xerC tyrosine recombinase XerC low > 84
Rahnella sp. WP5 0.16 EX31_RS08250 TonB-dependent siderophore receptor 0.56 EX31_RS15165 tyrosine recombinase XerC low > 89
Rhodanobacter sp. FW510-T8 0.16 OKGIIK_05420 TonB-dependent receptor 0.37 OKGIIK_15325 xerC tyrosine recombinase XerC — —
Marinobacter adhaerens HP15 0.11 HP15_3002 TonB-dependent receptor 0.44 HP15_250 site-specific tyrosine recombinase XerC low > 73
Bacteroides thetaiotaomicron VPI-5482 0.10 BT0496 TonB-dependent receptor (NCBI ptt file) 0.29 BT2742 integrase, site-specific recombinase (NCBI ptt file) low > 81
Ralstonia solanacearum PSI07 0.09 RPSI07_RS03355 TonB-dependent receptor 0.35 RPSI07_RS23690 tyrosine recombinase XerC low > 81
Bacteroides ovatus ATCC 8483 0.09 BACOVA_03823 TonB-dependent receptor 0.29 BACOVA_01050 site-specific recombinase, phage integrase family/ribosomal subunit interface protein low > 94
Ralstonia solanacearum IBSBF1503 0.08 RALBFv3_RS19830 TonB-dependent receptor 0.33 RALBFv3_RS09675 tyrosine recombinase XerC low > 76
Ralstonia solanacearum UW163 0.08 UW163_RS19345 TonB-dependent receptor 0.33 UW163_RS03905 tyrosine recombinase XerC — —
Ralstonia solanacearum GMI1000 0.08 RS_RS20995 TonB-dependent receptor 0.34 RS_RS00260 Tyrosine recombinase XerC 1 low > 80

Not shown: 4 genomes with orthologs for CSW01_02525 only; 43 genomes with orthologs for CSW01_00650 only