Conservation of cofitness between CSW01_00835 and CSW01_00330 in Vibrio cholerae E7946 ATCC 55056

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_00835 HTH-type transcriptional activator IlvY 1.0 CSW01_00330 fluoride efflux transporter CrcB 0.45 16
Shewanella sp. ANA-3 0.51 Shewana3_0354 DNA-binding transcriptional regulator IlvY (RefSeq) 0.41 Shewana3_2053 camphor resistance protein CrcB (RefSeq) — —
Shewanella oneidensis MR-1 0.51 SO4350 ilvY transcriptional regulator ilvY (NCBI ptt file) 0.41 SO2309 crcB crcB protein (NCBI ptt file) — —
Serratia liquefaciens MT49 0.48 IAI46_24330 HTH-type transcriptional activator IlvY 0.26 IAI46_05885 fluoride efflux transporter CrcB low > 87
Shewanella amazonensis SB2B 0.48 Sama_3283 DNA-binding transcriptional regulator IlvY (RefSeq) 0.45 Sama_1775 crcB protein (RefSeq) low > 62
Rahnella sp. WP5 0.47 EX31_RS15015 HTH-type transcriptional activator IlvY 0.26 EX31_RS23045 fluoride efflux transporter CrcB low > 89
Erwinia tracheiphila SCR3 0.47 LU632_RS24390 ilvY HTH-type transcriptional activator IlvY 0.25 LU632_RS01320 crcB fluoride efflux transporter CrcB low > 73
Erwinia tracheiphila HP pepo 2.2 0.47 IJEDHG_09105 ilvY HTH-type transcriptional activator IlvY 0.25 IJEDHG_26360 crcB fluoride efflux transporter CrcB low > 61
Dickeya dianthicola 67-19 0.47 HGI48_RS20275 HTH-type transcriptional activator IlvY 0.24 HGI48_RS06170 fluoride efflux transporter CrcB low > 71
Dickeya dadantii 3937 0.46 DDA3937_RS20135 HTH-type transcriptional activator IlvY 0.24 DDA3937_RS06125 fluoride efflux transporter CrcB low > 74
Dickeya dianthicola ME23 0.46 DZA65_RS21315 HTH-type transcriptional activator IlvY 0.24 DZA65_RS06515 fluoride efflux transporter CrcB low > 75
Erwinia amylovora T8 0.46 OLJFJH_06240 HTH-type transcriptional activator IlvY 0.22 OLJFJH_18395 fluoride efflux transporter CrcB low > 58
Pantoea agglomerans CFBP13505 P0401 0.46 PagCFBP13505_RS20920 HTH-type transcriptional activator IlvY 0.20 PagCFBP13505_RS20765 fluoride efflux transporter CrcB low > 74
Pantoea sp. MT58 0.46 IAI47_01045 HTH-type transcriptional activator IlvY 0.21 IAI47_01170 fluoride efflux transporter CrcB low > 76
Shewanella loihica PV-4 0.45 Shew_0287 DNA-binding transcriptional regulator IlvY (RefSeq) 0.43 Shew_2021 CrcB protein (RefSeq) — —
Pectobacterium carotovorum WPP14 0.45 HER17_RS01095 HTH-type transcriptional activator IlvY 0.24 HER17_RS15285 fluoride efflux transporter CrcB low > 75
Escherichia coli ECRC102 0.44 NIAGMN_12385 ilvY HTH-type transcriptional activator IlvY 0.25 NIAGMN_05470 crcB fluoride efflux transporter CrcB low > 80
Escherichia coli ECRC99 0.44 KEDOAH_13520 ilvY HTH-type transcriptional activator IlvY 0.25 KEDOAH_20555 crcB fluoride efflux transporter CrcB — —
Escherichia coli BW25113 0.44 b3773 ilvY DNA-binding transcriptional dual regulator (NCBI) 0.26 b0624 crcB camphor resistance protein CrcB (NCBI) low > 76
Escherichia coli ECRC100 0.44 OKFHMN_14630 ilvY HTH-type transcriptional activator IlvY 0.25 OKFHMN_07415 crcB fluoride efflux transporter CrcB low > 79
Escherichia coli ECRC101 0.44 MCAODC_05135 ilvY HTH-type transcriptional activator IlvY 0.25 MCAODC_26630 crcB fluoride efflux transporter CrcB low > 87
Escherichia coli ECRC98 0.44 JDDGAC_18250 ilvY HTH-type transcriptional activator IlvY 0.25 JDDGAC_11060 crcB fluoride efflux transporter CrcB low > 87
Escherichia coli BL21 0.44 ECD_03651 transcriptional activator of ilvC; autorepressor 0.25 ECD_00594 fluoride efflux channel, dual topology membrane protein low > 61
Escherichia coli ECOR27 0.44 NOLOHH_06765 ilvY HTH-type transcriptional activator IlvY 0.25 NOLOHH_23790 crcB fluoride efflux transporter CrcB low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04280 HTH-type transcriptional regulator GltC 0.25 OHPLBJKB_03081 Putative fluoride ion transporter CrcB low > 74
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4445 Transcriptional regulator 0.24 EX28DRAFT_2338 protein CrcB low > 76
Escherichia coli Nissle 1917 0.44 ECOLIN_RS21675 HTH-type transcriptional activator IlvY 0.25 ECOLIN_RS03405 fluoride efflux transporter CrcB — —
Escherichia coli ECRC62 0.44 BNILDI_04760 ilvY HTH-type transcriptional activator IlvY 0.25 BNILDI_21800 crcB fluoride efflux transporter CrcB low > 75
Escherichia fergusonii Becca 0.44 EFB2_04863 HTH-type transcriptional regulator HdfR 0.25 EFB2_03467 Putative fluoride ion transporter CrcB low > 86
Enterobacter sp. TBS_079 0.44 MPMX20_04497 HTH-type transcriptional regulator GltC 0.24 MPMX20_01284 Putative fluoride ion transporter CrcB low > 85
Escherichia coli ECOR38 0.44 HEPCGN_13340 ilvY HTH-type transcriptional activator IlvY 0.26 HEPCGN_00860 crcB fluoride efflux transporter CrcB low > 88
Klebsiella pneumoniae MKP103 0.43 KDGMDA_09500 HTH-type transcriptional activator IlvY 0.23 KDGMDA_16345 fluoride efflux transporter CrcB low > 95
Klebsiella michiganensis M5al 0.43 BWI76_RS00985 transcriptional regulator IlvY 0.23 BWI76_RS07985 fluoride ion transporter CrcB low > 92
Alteromonas macleodii MIT1002 0.41 MIT1002_04044 HTH-type transcriptional regulator GltC 0.43 MIT1002_02177 camphor resistance protein CrcB low > 70
Azospirillum sp. SherDot2 0.16 MPMX19_03927 HTH-type transcriptional activator CmpR 0.24 MPMX19_01719 Putative fluoride ion transporter CrcB low > 112
Paraburkholderia sabiae LMG 24235 0.15 QEN71_RS19835 LysR family transcriptional regulator 0.22 QEN71_RS23260 fluoride efflux transporter CrcB low > 153
Pseudomonas stutzeri RCH2 0.15 Psest_2671 Transcriptional regulator 0.23 Psest_2035 crcB protein low > 67

Not shown: 11 genomes with orthologs for CSW01_00835 only; 30 genomes with orthologs for CSW01_00330 only