Conservation of cofitness between CSW01_08635 and CSW01_00240 in Vibrio cholerae E7946 ATCC 55056

18 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Vibrio cholerae E7946 ATCC 55056 1.0 CSW01_08635 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM 1.0 CSW01_00240 LysM peptidoglycan-binding domain-containing protein 0.41 18
Shewanella sp. ANA-3 0.40 Shewana3_0557 methyltransferase type 11 (RefSeq) 0.22 Shewana3_0036 peptidoglycan-binding LysM (RefSeq) low > 73
Shewanella oneidensis MR-1 0.40 SO0558 smtA smtA protein (NCBI ptt file) 0.22 SO0033 LysM domain protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.37 Sama_3149 smtA protein (RefSeq) 0.22 Sama_0044 LysM domain-containing protein (RefSeq) low > 62
Shewanella loihica PV-4 0.36 Shew_0440 methyltransferase type 12 (RefSeq) 0.24 Shew_3735 peptidoglycan-binding LysM (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.30 MIT1002_01973 putative S-adenosyl-L-methionine-dependent methyltransferase 0.16 MIT1002_00021 LysM domain/BON superfamily protein low > 70
Pseudomonas aeruginosa MRSN321 0.29 DY961_RS09715 methyltransferase domain-containing protein 0.22 DY961_RS26300 LysM peptidoglycan-binding domain-containing protein low > 100
Pseudomonas aeruginosa PA14 0.29 IKLFDK_29635 SAM-dependent methyltransferase 0.22 IKLFDK_25460 peptidoglycan-binding protein 0.27 74
Pseudomonas aeruginosa PUPa3 0.28 DQ20_RS52330 methyltransferase domain-containing protein 0.21 DQ20_RS58705 LysM peptidoglycan-binding domain-containing protein low > 101
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_08125 SAM-dependent methyltransferase 0.19 AO356_11290 peptidoglycan-binding protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.28 Pf6N2E2_3497 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.19 Pf6N2E2_4124 Uncharacterized protein with LysM domain, COG1652 low > 103
Pseudomonas fluorescens FW300-N1B4 0.28 Pf1N1B4_1289 3-demethylubiquinone-9 3-methyltransferase (EC 2.1.1.64) 0.19 Pf1N1B4_1911 Uncharacterized protein with LysM domain, COG1652 low > 87
Pseudomonas sp. DMC3 0.27 GFF3328 tRNA 5-carboxymethoxyuridine methyltransferase 0.19 GFF593 hypothetical protein low > 89
Pseudomonas sp. RS175 0.27 PFR28_05234 tRNA 5-carboxymethoxyuridine methyltransferase 0.19 PFR28_04660 hypothetical protein low > 88
Pseudomonas stutzeri RCH2 0.27 Psest_3358 Methyltransferase domain. 0.21 Psest_0024 LysM domain. low > 67
Pseudomonas segetis P6 0.26 MPMX49_04011 tRNA 5-carboxymethoxyuridine methyltransferase 0.20 MPMX49_00276 hypothetical protein 0.37 55
Pseudomonas syringae pv. syringae B728a 0.26 Psyr_0641 smtA protein 0.19 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.26 Psyr_0641 smtA protein 0.19 Psyr_0020 Peptidoglycan-binding LysM low > 86
Pseudomonas fluorescens FW300-N2E3 0.26 AO353_13750 SAM-dependent methyltransferase 0.20 AO353_10645 peptidoglycan-binding protein low > 101

Not shown: 39 genomes with orthologs for CSW01_08635 only; 20 genomes with orthologs for CSW01_00240 only