Conservation of cofitness between BPHYT_RS16225 and BPHYT_RS09100 in Burkholderia phytofirmans PsJN

16 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS16225 D-alanyl-D-alanine carboxypeptidase 1.0 BPHYT_RS09100 stationary phase survival protein SurE 0.56 8
Paraburkholderia bryophila 376MFSha3.1 0.83 H281DRAFT_04181 D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.96 H281DRAFT_00840 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase low > 103
Paraburkholderia graminis OAS925 0.82 ABIE53_003419 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4) 0.96 ABIE53_002054 5'-nucleotidase low > 113
Paraburkholderia sabiae LMG 24235 0.68 QEN71_RS02470 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.94 QEN71_RS22255 5'/3'-nucleotidase SurE low > 153
Cupriavidus basilensis FW507-4G11 0.41 RR42_RS03245 D-alanyl-D-alanine carboxypeptidase 0.60 RR42_RS13200 stationary phase survival protein SurE low > 128
Ralstonia solanacearum GMI1000 0.41 RS_RS02925 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 RS_RS06030 5'-nucleotidase SurE low > 80
Ralstonia solanacearum UW163 0.41 UW163_RS01390 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 UW163_RS12685 5'/3'-nucleotidase SurE — —
Ralstonia solanacearum IBSBF1503 0.41 RALBFv3_RS12220 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 RALBFv3_RS15220 5'/3'-nucleotidase SurE low > 76
Ralstonia solanacearum PSI07 0.41 RPSI07_RS21110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.70 RPSI07_RS18155 5'/3'-nucleotidase SurE low > 81
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS08110 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.69 ABZR87_RS10860 5'/3'-nucleotidase SurE — —
Pseudomonas sp. RS175 0.27 PFR28_01057 D-alanyl-D-alanine carboxypeptidase DacC 0.41 PFR28_00424 '5'-nucleotidase SurE' transl_table=11 low > 88
Pseudomonas fluorescens FW300-N2C3 0.27 AO356_02595 D-alanyl-D-alanine carboxypeptidase 0.41 AO356_05900 stationary phase survival protein SurE low > 104
Pseudomonas fluorescens FW300-N2E2 0.27 Pf6N2E2_2344 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.42 Pf6N2E2_3040 5-nucleotidase SurE (EC 3.1.3.5) low > 103
Acidovorax sp. GW101-3H11 0.25 Ac3H11_670 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.55 Ac3H11_1784 5-nucleotidase SurE (EC 3.1.3.5) low > 79
Castellaniella sp019104865 MT123 0.24 ABCV34_RS15375 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 0.61 ABCV34_RS03030 5'/3'-nucleotidase SurE low > 48
Variovorax sp. SCN45 0.24 GFF5516 D-alanyl-D-alanine carboxypeptidase (EC 3.4.16.4) 0.57 GFF2845 5'-nucleotidase SurE (EC 3.1.3.5) low > 127
Shewanella oneidensis MR-1 0.09 SO2394 dacB penicillin-binding protein 4 (NCBI ptt file) 0.51 SO3435 surE stationary-phase survival protein SurE (NCBI ptt file) low > 76

Not shown: 1 genomes with orthologs for BPHYT_RS16225 only; 64 genomes with orthologs for BPHYT_RS09100 only