Conservation of cofitness between BPHYT_RS27110 and BPHYT_RS06770 in Burkholderia phytofirmans PsJN

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Burkholderia phytofirmans PsJN 1.0 BPHYT_RS27110 dehydrogenase 1.0 BPHYT_RS06770 aminotransferase 0.22 19
Paraburkholderia bryophila 376MFSha3.1 0.89 H281DRAFT_02928 uncharacterized oxidoreductase 0.96 H281DRAFT_04597 2-keto-4-methylthiobutyrate aminotransferase apoenzyme low > 103
Paraburkholderia sabiae LMG 24235 0.76 QEN71_RS10905 malate/lactate/ureidoglycolate dehydrogenase 0.91 QEN71_RS24010 pyridoxal phosphate-dependent aminotransferase low > 153
Klebsiella michiganensis M5al 0.55 BWI76_RS16775 malate/lactate/ureidoglycolate dehydrogenase 0.50 BWI76_RS07920 methionine aminotransferase low > 92
Escherichia coli Nissle 1917 0.54 ECOLIN_RS04265 hydroxycarboxylate dehydrogenase HcXB 0.49 ECOLIN_RS03295 methionine-oxo-acid transaminase — —
Escherichia fergusonii Becca 0.54 EFB2_03304 Hydroxycarboxylate dehydrogenase B 0.49 EFB2_03491 Methionine aminotransferase low > 86
Escherichia coli ECRC101 0.53 MCAODC_25485 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 MCAODC_26750 ybdL methionine-oxo-acid transaminase low > 87
Escherichia coli ECOR27 0.53 NOLOHH_22620 hcxB hydroxycarboxylate dehydrogenase HcXB 0.48 NOLOHH_23910 ybdL methionine-oxo-acid transaminase low > 75
Escherichia coli ECRC102 0.53 NIAGMN_04315 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 NIAGMN_05590 ybdL methionine-oxo-acid transaminase — —
Escherichia coli BW25113 0.53 b0801 ybiC predicted dehydrogenase (NCBI) 0.49 b0600 ybdL putative aminotransferase (NCBI) low > 76
Escherichia coli BL21 0.53 ECD_00768 putative dehydrogenase 0.49 ECD_00568 methionine aminotransferase, PLP-dependent low > 61
Escherichia coli ECRC100 0.53 OKFHMN_06270 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 OKFHMN_07535 ybdL methionine-oxo-acid transaminase low > 80
Escherichia coli ECRC99 0.53 KEDOAH_21640 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 KEDOAH_20435 ybdL methionine-oxo-acid transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.53 OHPLBJKB_02912 Hydroxycarboxylate dehydrogenase B 0.49 OHPLBJKB_03105 Methionine aminotransferase low > 73
Escherichia coli ECRC98 0.53 JDDGAC_09905 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 JDDGAC_11180 ybdL methionine-oxo-acid transaminase low > 86
Escherichia coli ECOR38 0.53 HEPCGN_01775 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 HEPCGN_00745 ybdL methionine-oxo-acid transaminase low > 87
Escherichia coli ECRC62 0.53 BNILDI_20900 hcxB hydroxycarboxylate dehydrogenase HcXB 0.49 BNILDI_21920 ybdL methionine-oxo-acid transaminase low > 75
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS29130 dehydrogenase 0.75 RR42_RS05770 aminotransferase low > 128
Variovorax sp. SCN45 0.40 GFF4621 Hydroxycarboxylate dehydrogenase (NADP+) HcxB 0.67 GFF245 Aspartate aminotransferase (EC 2.6.1.1) low > 127
Variovorax sp. OAS795 0.40 ABID97_RS05795 malate/lactate/ureidoglycolate dehydrogenase 0.67 ABID97_RS16605 pyridoxal phosphate-dependent aminotransferase low > 91
Pectobacterium carotovorum WPP14 0.39 HER17_RS14120 malate/lactate/ureidoglycolate dehydrogenase 0.50 HER17_RS04575 pyridoxal phosphate-dependent aminotransferase low > 75
Azospirillum sp. SherDot2 0.38 MPMX19_03677 Hydroxycarboxylate dehydrogenase B 0.38 MPMX19_04906 Methionine aminotransferase low > 112
Azospirillum brasilense Sp245 0.37 AZOBR_RS16020 malate dehydrogenase 0.35 AZOBR_RS20195 aminotransferase low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.37 GFF2065 Malate dehydrogenase (EC 1.1.1.37) 0.66 GFF4304 Aspartate aminotransferase (EC 2.6.1.1) low > 90
Rhodopseudomonas palustris CGA009 0.36 TX73_019450 malate/lactate/ureidoglycolate dehydrogenase 0.34 TX73_010375 aminotransferase low > 86
Bosea sp. OAE506 0.33 ABIE41_RS16945 malate/lactate/ureidoglycolate dehydrogenase 0.38 ABIE41_RS03840 aminotransferase low > 77
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.20 GFF3033 Malate dehydrogenase (EC 1.1.1.37) 0.49 GFF4508 Aspartate aminotransferase (EC 2.6.1.1) low > 78
Pseudomonas fluorescens FW300-N2E3 0.19 AO353_23830 lactate dehydrogenase 0.50 AO353_15915 aminotransferase low > 101
Pseudomonas syringae pv. syringae B728a 0.18 Psyr_2143 delta1-piperideine 2-carboxylate reductase 0.50 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.18 Psyr_2143 delta1-piperideine 2-carboxylate reductase 0.50 Psyr_1253 2-keto-4-methylthiobutyrate aminotransferase apoenzyme — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.18 CA264_18075 3-dehydro-L-gulonate 2-dehydrogenase 0.54 CA264_15855 aminotransferase low > 74
Pseudomonas simiae WCS417 0.18 PS417_12515 lactate dehydrogenase 0.49 PS417_23120 aminotransferase low > 88
Pseudomonas fluorescens FW300-N2C3 0.18 AO356_26080 lactate dehydrogenase 0.50 AO356_06565 aminotransferase — —
Pseudomonas sp. RS175 0.18 PFR28_01661 Delta(1)-pyrroline-2-carboxylate/Delta(1)- piperideine-2-carboxylate reductase 0.49 PFR28_00302 Methionine aminotransferase low > 88
Pseudomonas putida KT2440 0.18 PP_3591 Delta 1-piperideine-2-carboxylate reductase 0.50 PP_0858 putative methionine/glutamine aminotransferase low > 96
Herbaspirillum seropedicae SmR1 0.17 HSERO_RS16685 lactate dehydrogenase 0.75 HSERO_RS15115 aminotransferase low > 78
Pseudomonas fluorescens GW456-L13 0.17 PfGW456L13_2974 Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) 0.51 PfGW456L13_4856 Aspartate aminotransferase (EC 2.6.1.1) low > 87
Pseudomonas fluorescens FW300-N2E2 0.17 Pf6N2E2_1089 Delta 1-piperideine-2-carboxylate reductase (EC 1.5.1.21) / Delta 1-pyrroline-2-carboxylate reductase (EC 1.5.1.1) 0.50 Pf6N2E2_3173 Aspartate aminotransferase (EC 2.6.1.1) low > 103

Not shown: 9 genomes with orthologs for BPHYT_RS27110 only; 30 genomes with orthologs for BPHYT_RS06770 only