Conservation of cofitness between BNILDI_15745 and BNILDI_08245 in Escherichia coli ECRC62

32 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_15745 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.0 BNILDI_08245 nhaA Na+/H+ antiporter NhaA 0.65 19
Escherichia coli ECOR27 1.00 NOLOHH_16950 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NOLOHH_03360 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli BL21 0.99 ECD_01806 16S rRNA m(5)C1407 methyltransferase, SAM-dependent 1.00 ECD_00018 sodium-proton antiporter — —
Escherichia coli ECOR38 0.99 HEPCGN_04840 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 HEPCGN_09015 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia fergusonii Becca 0.98 EFB2_02166 Ribosomal RNA small subunit methyltransferase F 0.99 EFB2_04024 Na(+)/H(+) antiporter NhaA low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.98 OHPLBJKB_01896 Ribosomal RNA small subunit methyltransferase F 1.00 OHPLBJKB_03642 Na(+)/H(+) antiporter NhaA low > 73
Escherichia coli BW25113 0.98 b1835 yebU putative nucleolar proteins (VIMSS) 0.99 b0019 nhaA pH-dependent sodium/proton antiporter (NCBI) low > 76
Escherichia coli Nissle 1917 0.98 ECOLIN_RS10215 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.99 ECOLIN_RS00105 Na+/H+ antiporter NhaA — —
Escherichia coli ECRC101 0.97 MCAODC_18965 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 MCAODC_01545 nhaA Na+/H+ antiporter NhaA low > 87
Escherichia coli ECRC100 0.97 OKFHMN_26440 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 OKFHMN_11030 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC99 0.97 KEDOAH_01665 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 KEDOAH_17125 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC102 0.97 NIAGMN_01620 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 NIAGMN_08880 nhaA Na+/H+ antiporter NhaA — —
Escherichia coli ECRC98 0.97 JDDGAC_01015 rsmF 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 1.00 JDDGAC_14625 nhaA Na+/H+ antiporter NhaA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.87 GFF2850 Ribosomal RNA small subunit methyltransferase F (EC 2.1.1.-) 0.91 GFF1119 Na+/H+ antiporter NhaA type low > 78
Enterobacter asburiae PDN3 0.80 EX28DRAFT_0721 NOL1/NOP2/sun family putative RNA methylase 0.77 EX28DRAFT_3628 Na+/H+ antiporter NhaA low > 76
Enterobacter sp. TBS_079 0.79 MPMX20_02742 Ribosomal RNA small subunit methyltransferase F 0.75 MPMX20_00722 Na(+)/H(+) antiporter NhaA low > 85
Klebsiella michiganensis M5al 0.76 BWI76_RS18000 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.82 BWI76_RS04315 Na+/H+ antiporter NhaA low > 92
Pantoea sp. MT58 0.70 IAI47_08680 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.68 IAI47_16165 Na+/H+ antiporter NhaA — —
Serratia liquefaciens MT49 0.68 IAI46_10775 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.61 IAI46_03085 Na+/H+ antiporter NhaA low > 86
Rahnella sp. WP5 0.67 EX31_RS24855 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.62 EX31_RS03890 Na+/H+ antiporter NhaA low > 89
Pectobacterium carotovorum WPP14 0.67 HER17_RS11715 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.59 HER17_RS02850 Na+/H+ antiporter NhaA — —
Dickeya dadantii 3937 0.66 DDA3937_RS11990 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.57 DDA3937_RS18360 Na+/H+ antiporter NhaA — —
Dickeya dianthicola ME23 0.65 DZA65_RS12530 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.56 DZA65_RS19435 Na+/H+ antiporter NhaA — —
Dickeya dianthicola 67-19 0.65 HGI48_RS12080 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.56 HGI48_RS18295 Na+/H+ antiporter NhaA — —
Vibrio cholerae E7946 ATCC 55056 0.57 CSW01_07545 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF 0.55 CSW01_08180 Na+/H+ antiporter NhaA low > 62
Shewanella loihica PV-4 0.51 Shew_1583 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.57 Shew_1042 Na+/H+ antiporter NhaA (RefSeq) low > 60
Shewanella sp. ANA-3 0.51 Shewana3_1770 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.59 Shewana3_3038 Na+/H+ antiporter NhaA (RefSeq) low > 73
Shewanella oneidensis MR-1 0.50 SO2609 NOL1/NOP2/sun family protein (NCBI ptt file) 0.60 SO1336 nhaA Na+/H+ antiporter (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.48 Sama_2039 yebU rRNA (cytosine-C(5)-)-methyltransferase RsmF (RefSeq) 0.58 Sama_0868 Na+/H+ antiporter (RefSeq) low > 62
Bacteroides thetaiotaomicron VPI-5482 0.19 BT2042 tRNA and rRNA cytosine-C5-methylase (NCBI ptt file) 0.38 BT0634 Na+/H+ antiporter 1 (NCBI ptt file) low > 81
Echinicola vietnamensis KMM 6221, DSM 17526 0.18 Echvi_1153 tRNA and rRNA cytosine-C5-methylases 0.34 Echvi_4461 Na+/H+ antiporter NhaA low > 79
Bacteroides stercoris CC31F 0.17 HMPREF1181_RS08100 rRNA cytosine-C5-methyltransferase 0.37 HMPREF1181_RS16585 Na+/H+ antiporter NhaA low > 56
Parabacteroides merdae CL09T00C40 0.16 HMPREF1078_RS16740 rRNA cytosine-C5-methyltransferase 0.35 HMPREF1078_RS00855 Na+/H+ antiporter NhaA low > 61

Not shown: 4 genomes with orthologs for BNILDI_15745 only; 34 genomes with orthologs for BNILDI_08245 only