Conservation of cofitness between BNILDI_11920 and BNILDI_01975 in Escherichia coli ECRC62

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC62 1.0 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 BNILDI_01975 aaeR HTH-type transcriptional activator AaeR 0.69 3
Escherichia coli BW25113 1.00 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 1.00 b3243 aaeR predicted DNA-binding transcriptional regulator, efflux system (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_02456 putative 4Fe-4S cluster-containing protein 1.00 ECD_03103 transcriptional regulator for aaeXAB operon low > 61
Escherichia coli ECOR27 1.00 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NOLOHH_09560 aaeR HTH-type transcriptional activator AaeR low > 75
Escherichia coli ECRC99 0.99 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_10390 aaeR HTH-type transcriptional activator AaeR — —
Escherichia coli ECRC98 0.99 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 JDDGAC_21385 aaeR HTH-type transcriptional activator AaeR low > 86
Escherichia coli ECRC101 0.99 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_08280 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli HS(pFamp)R (ATCC 700891) 0.99 OHPLBJKB_01145 Ferredoxin YfhL 1.00 OHPLBJKB_00461 HTH-type transcriptional regulator DmlR low > 73
Escherichia coli ECRC102 0.99 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_15520 aaeR HTH-type transcriptional activator AaeR — —
Escherichia coli ECOR38 0.99 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 HEPCGN_16625 aaeR HTH-type transcriptional activator AaeR low > 87
Escherichia coli ECRC100 0.99 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_17760 aaeR HTH-type transcriptional activator AaeR low > 80
Escherichia coli Nissle 1917 0.98 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 1.00 ECOLIN_RS18590 HTH-type transcriptional activator AaeR — —
Escherichia fergusonii Becca 0.98 EFB2_01334 Ferredoxin YfhL 1.00 EFB2_00587 HTH-type transcriptional regulator DmlR low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.97 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.94 GFF2141 LysR family transcriptional regulator QseA low > 78
Enterobacter asburiae PDN3 0.96 EX28DRAFT_0084 4Fe-4S dicluster domain 0.91 EX28DRAFT_3294 Transcriptional regulator low > 76
Enterobacter sp. TBS_079 0.94 MPMX20_03433 Ferredoxin YfhL 0.90 MPMX20_04149 HTH-type transcriptional regulator DmlR low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.89 BWI76_RS25460 transcriptional regulator — —
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.82 IAI46_22620 HTH-type transcriptional activator AaeR low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.83 HER17_RS20120 HTH-type transcriptional activator AaeR low > 75
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.83 DDA3937_RS01465 HTH-type transcriptional activator AaeR low > 74
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.82 HGI48_RS01385 HTH-type transcriptional activator AaeR low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.82 DZA65_RS01445 HTH-type transcriptional activator AaeR low > 75
Rahnella sp. WP5 0.79 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.81 EX31_RS12270 HTH-type transcriptional activator AaeR low > 89
Pantoea sp. MT58 0.75 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.81 IAI47_02470 HTH-type transcriptional activator AaeR low > 76
Ralstonia solanacearum PSI07 0.61 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein 0.26 RPSI07_RS08395 LysR family transcriptional regulator — —
Ralstonia sp. UNC404CL21Col 0.60 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin 0.25 ABZR87_RS04150 LysR family transcriptional regulator CrgA low > 80
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.27 QEN71_RS30490 LysR family transcriptional regulator low > 153
Acidovorax sp. GW101-3H11 0.58 Ac3H11_4828 Ferredoxin 0.25 Ac3H11_3517 Transcriptional regulator, LysR family low > 79
Paraburkholderia graminis OAS925 0.55 ABIE53_000703 ferredoxin 0.28 ABIE53_002928 DNA-binding transcriptional LysR family regulator low > 113
Paraburkholderia bryophila 376MFSha3.1 0.55 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.26 H281DRAFT_05865 transcriptional regulator, LysR family low > 103
Pseudomonas sp. S08-1 0.55 OH686_14145 Uncharacterized ferredoxin-like protein YfhL 0.29 OH686_07440 Transcriptional regulator, LysR family low > 80
Pseudomonas putida KT2440 0.55 PP_5124 putative 4Fe-4S cluster-containing protein 0.25 PP_1262 LysR family transcriptional regulator — —
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.25 Pf1N1B4_1954 Transcriptional regulator — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02825 ferredoxin 0.28 BPHYT_RS13765 LysR family transcriptional regulator low > 109
Variovorax sp. SCN45 0.50 GFF2345 Uncharacterized ferredoxin-like protein YfhL 0.26 GFF7142 Transcriptional regulator, LysR family low > 127
Xanthomonas campestris pv. campestris strain 8004 0.47 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding 0.24 Xcc-8004.55.1 transcriptional regulator — —

Not shown: 36 genomes with orthologs for BNILDI_11920 only; 3 genomes with orthologs for BNILDI_01975 only