Conservation of cofitness between Atu3143 and Atu3135 in Agrobacterium fabrum C58

24 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu3143 hypothetical protein 1.0 Atu3135 ABC transporter permease 0.71 3
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF799 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.54 GFF795 TRAP-type C4-dicarboxylate transport system, large permease component 0.57 2
Pseudomonas putida KT2440 0.53 PP_1171 Uronate dehydrogenase (EC 1.1.1.203) (from data) 0.46 PP_1167 D-glucuronate / D-galacturonate TRAP transporter, large permease component (from data) 0.81 2
Variovorax sp. OAS795 0.53 ABID97_RS10350 NAD(P)-dependent oxidoreductase 0.51 ABID97_RS10330 TRAP transporter large permease 0.81 1
Sinorhizobium meliloti 1021 0.52 SMc04145 hypothetical protein 0.70 SM_b21351 C4-dicarboxylate large membrane transport protein low > 103
Variovorax sp. SCN45 0.52 GFF2916 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.41 GFF2920 TRAP-type C4-dicarboxylate transport system, large permease component low > 127
Pseudomonas sp. BP01 0.52 JOY50_RS02025 NAD(P)-dependent oxidoreductase 0.46 JOY50_RS02045 TRAP transporter large permease low > 84
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_489 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.46 Pf6N2E2_485 TRAP-type C4-dicarboxylate transport system, large permease component low > 103
Pseudomonas sp. RS175 0.51 PFR28_02436 Uronate dehydrogenase 0.46 PFR28_02440 C4-dicarboxylate TRAP transporter large permease protein DctM 0.89 6
Pseudomonas fluorescens FW300-N2C3 0.51 AO356_23065 NAD-dependent dehydratase 0.47 AO356_23045 hypothetical protein low > 104
Pseudomonas segetis P6 0.51 MPMX49_04068 Uronate dehydrogenase 0.49 MPMX49_04072 C4-dicarboxylate TRAP transporter large permease protein DctM low > 75
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS20315 NAD(P)-dependent oxidoreductase 0.40 ABZR87_RS21100 TRAP transporter large permease low > 80
Pseudomonas simiae WCS417 0.50 PS417_17360 D-galacturonate dehydrogenase (EC 1.1.1.203) (from data) 0.47 PS417_17380 membrane protein low > 88
Pseudomonas sp. DMC3 0.50 GFF1618 Uronate dehydrogenase 0.48 GFF1614 C4-dicarboxylate TRAP transporter large permease protein DctM low > 89
Pseudomonas fluorescens SBW25 0.50 PFLU_RS19285 NAD(P)-dependent oxidoreductase 0.47 PFLU_RS19305 TRAP transporter large permease low > 109
Pseudomonas lactucae CFBP13502 0.50 GEMAOFIL_03766 Uronate dehydrogenase 0.47 GEMAOFIL_03770 C4-dicarboxylate TRAP transporter large permease protein DctM — —
Pseudomonas fluorescens SBW25-INTG 0.50 PFLU_RS19285 NAD(P)-dependent oxidoreductase 0.47 PFLU_RS19305 TRAP transporter large permease 0.13 20
Pseudomonas stutzeri RCH2 0.50 Psest_0365 NAD dependent epimerase/dehydratase family. 0.46 Psest_0361 TRAP transporter, DctM subunit 0.22 35
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0902 conserved hypothetical protein 0.46 Psyr_0898 TRAP dicarboxylate transporter, DctM subunit low > 86
Acidovorax sp. GW101-3H11 0.49 Ac3H11_3958 UDP-glucose 4-epimerase (EC 5.1.3.2) 0.46 Ac3H11_3955 TRAP-type C4-dicarboxylate transport system, large permease component low > 79
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0902 conserved hypothetical protein 0.46 Psyr_0898 TRAP dicarboxylate transporter, DctM subunit low > 86
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_03826 uronate dehydrogenase 0.40 H281DRAFT_05326 TRAP transporter, DctM subunit low > 103
Paraburkholderia graminis OAS925 0.48 ABIE53_003986 uronate dehydrogenase 0.40 ABIE53_006500 tripartite ATP-independent transporter DctM subunit low > 113
Burkholderia phytofirmans PsJN 0.48 BPHYT_RS24165 NAD-dependent dehydratase 0.39 BPHYT_RS24185 C4-dicarboxylate ABC transporter permease low > 109
Pantoea agglomerans CFBP13505 P0401 0.18 PagCFBP13505_RS13875 NAD(P)-dependent oxidoreductase 0.47 PagCFBP13505_RS16475 TRAP transporter large permease low > 74

Not shown: 11 genomes with orthologs for Atu3143 only; 32 genomes with orthologs for Atu3135 only