Conservation of cofitness between Atu2130 and Atu0179 in Agrobacterium fabrum C58

35 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Agrobacterium fabrum C58 1.0 Atu2130 hypothetical protein 1.0 Atu0179 hypothetical protein 0.17 5
Rhizobium sp. OAE497 0.82 ABIE40_RS11990 RidA family protein 0.84 ABIE40_RS00560 carbon-phosphorus lyase complex subunit PhnI low > 107
Sinorhizobium meliloti 1021 0.61 SMc00791 hypothetical protein 0.78 SM_b20761 carbon-phosphorus lyase low > 103
Bosea sp. OAE506 0.54 ABIE41_RS03830 RidA family protein 0.58 ABIE41_RS07680 carbon-phosphorus lyase complex subunit PhnI low > 77
Phaeobacter inhibens DSM 17395 0.50 PGA1_c26890 putative endoribonuclease 0.62 PGA1_c04260 protein PhnI low > 62
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS05260 RidA family protein 0.61 QEN71_RS14210 carbon-phosphorus lyase complex subunit PhnI low > 153
Variovorax sp. SCN45 0.47 GFF3101 RidA/YER057c/UK114 superfamily, group 2, YoaB-like protein 0.62 GFF6259 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI (EC 2.7.8.37) low > 127
Pseudomonas fluorescens SBW25 0.46 PFLU_RS29375 RidA family protein 0.62 PFLU_RS08770 carbon-phosphorus lyase complex subunit PhnI low > 109
Pseudomonas fluorescens SBW25-INTG 0.46 PFLU_RS29375 RidA family protein 0.62 PFLU_RS08770 carbon-phosphorus lyase complex subunit PhnI low > 109
Pseudomonas syringae pv. syringae B728a 0.45 Psyr_0236 Endoribonuclease L-PSP 0.62 Psyr_2253 Phosphonate metabolism — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.45 Psyr_0236 Endoribonuclease L-PSP 0.62 Psyr_2253 Phosphonate metabolism low > 86
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS06580 aminoacrylate peracid reductase 0.57 RR42_RS28095 carbon-phosphorus lyase complex subunit PhnI low > 128
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS13660 aminoacrylate peracid reductase 0.60 BPHYT_RS29470 carbon-phosphorus lyase complex subunit PhnI — —
Serratia liquefaciens MT49 0.43 IAI46_14555 RidA family protein 0.57 IAI46_02095 carbon-phosphorus lyase complex subunit PhnI low > 86
Pseudomonas stutzeri RCH2 0.43 Psest_2118 Putative translation initiation inhibitor, yjgF family 0.60 Psest_0094 Uncharacterized enzyme of phosphonate metabolism — —
Pantoea sp. MT58 0.43 IAI47_08805 RidA family protein 0.57 IAI47_07765 carbon-phosphorus lyase complex subunit PhnI low > 76
Rahnella sp. WP5 0.42 EX31_RS10620 RidA family protein 0.57 EX31_RS08420 carbon-phosphorus lyase complex subunit PhnI low > 89
Dickeya dianthicola ME23 0.40 DZA65_RS11625 RidA family protein 0.57 DZA65_RS07965 carbon-phosphorus lyase complex subunit PhnI low > 75
Escherichia coli Nissle 1917 0.39 ECOLIN_RS10060 RidA family protein 0.56 ECOLIN_RS23735 alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.39 OHPLBJKB_01924 2-iminobutanoate/2-iminopropanoate deaminase 0.56 OHPLBJKB_03945 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI low > 73
Escherichia coli ECRC98 0.39 JDDGAC_01150 yoaB RutC family protein YoaB 0.56 JDDGAC_16295 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli ECRC102 0.39 NIAGMN_01490 yoaB RutC family protein YoaB 0.56 NIAGMN_10505 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli ECRC99 0.39 KEDOAH_01535 yoaB RutC family protein YoaB 0.56 KEDOAH_15505 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli ECRC101 0.39 MCAODC_18835 yoaB RutC family protein YoaB 0.56 MCAODC_03170 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli ECOR27 0.39 NOLOHH_17095 yoaB RutC family protein YoaB 0.57 NOLOHH_04920 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli BL21 0.39 ECD_01779 putative reactive intermediate deaminase 0.56 ECD_03971 ribophosphonate triphosphate synthase complex putative catalytic subunit low > 60
Escherichia coli ECRC62 0.39 BNILDI_15880 yoaB RutC family protein YoaB 0.56 BNILDI_06575 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli ECRC101 0.39 OKFHMN_26575 yoaB RutC family protein YoaB 0.56 OKFHMN_12660 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI — —
Escherichia coli BW25113 0.39 b1809 b1809 orf, hypothetical protein (VIMSS) 0.56 b4099 phnI carbon-phosphorus lyase complex subunit (NCBI) low > 76
Escherichia coli ECOR38 0.39 HEPCGN_04965 yoaB RutC family protein YoaB 0.56 HEPCGN_11290 phnI alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI low > 85
Escherichia fergusonii Becca 0.39 EFB2_02191 2-iminobutanoate/2-iminopropanoate deaminase 0.56 EFB2_04483 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI low > 86
Enterobacter asburiae PDN3 0.39 EX28DRAFT_0749 Putative translation initiation inhibitor, yjgF family 0.54 EX28DRAFT_4206 Uncharacterized enzyme of phosphonate metabolism low > 76
Enterobacter sp. TBS_079 0.39 MPMX20_02715 2-iminobutanoate/2-iminopropanoate deaminase 0.54 MPMX20_00319 Alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase subunit PhnI low > 85
Klebsiella michiganensis M5al 0.37 BWI76_RS17820 hypothetical protein 0.56 BWI76_RS02215 carbon-phosphorus lyase complex subunit PhnI low > 92
Dickeya dadantii 3937 0.33 DDA3937_RS11245 RidA family protein 0.58 DDA3937_RS07610 carbon-phosphorus lyase complex subunit PhnI low > 74
Dickeya dianthicola 67-19 0.30 HGI48_RS11280 RidA family protein 0.57 HGI48_RS07460 carbon-phosphorus lyase complex subunit PhnI low > 71

Not shown: 38 genomes with orthologs for Atu2130 only; 3 genomes with orthologs for Atu0179 only