Conservation of cofitness between AO353_08720 and AO353_22955 in Pseudomonas fluorescens FW300-N2E3

20 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_08720 glycine dehydrogenase 1.0 AO353_22955 tRNA hydroxylase 0.27 7
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.98 Pf1N1B4_4567 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.99 PfGW456L13_3375 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 87
Pseudomonas sp. S08-1 0.82 OH686_11165 glycine dehydrogenase 0.81 OH686_03955 tRNA-(ms[2]io[6]A)-hydroxylase low > 80
Pseudomonas stutzeri RCH2 0.82 Psest_0183 glycine dehydrogenase (decarboxylating) 0.66 Psest_2306 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 67
Pseudomonas putida KT2440 0.81 PP_5192 glycine dehydrogenase 0.81 PP_2188 putative tRNA-(Ms(2)io(6)a)-hydroxylase low > 96
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.38 MIT1002_02520 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) low > 70
Shewanella amazonensis SB2B 0.63 Sama_2719 glycine dehydrogenase (RefSeq) 0.41 Sama_1218 tRNA-hydroxylase (RefSeq) low > 62
Shewanella loihica PV-4 0.63 Shew_3062 glycine dehydrogenase (RefSeq) 0.44 Shew_2514 tRNA--hydroxylase (RefSeq) low > 60
Shewanella oneidensis MR-1 0.62 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.41 SO1788 miaE tRNA-(MS[2]IO[6]A)-hydroxylase (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.62 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.40 MPMX20_00558 hypothetical protein low > 85
Shewanella sp. ANA-3 0.62 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.40 Shewana3_2667 tRNA hydroxylase (RefSeq) low > 73
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.40 EX28DRAFT_3463 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.41 GFF942 tRNA-(ms[2]io[6]A)-hydroxylase (EC 1.-.-.-) low > 78
Pantoea sp. MT58 0.61 IAI47_03775 aminomethyl-transferring glycine dehydrogenase 0.40 IAI47_16820 tRNA-(ms[2]io[6]A)-hydroxylase low > 76
Klebsiella michiganensis M5al 0.61 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.40 BWI76_RS03020 tRNA hydroxylase low > 92
Dickeya dadantii 3937 0.61 DDA3937_RS03255 aminomethyl-transferring glycine dehydrogenase 0.40 DDA3937_RS05765 tRNA-(ms[2]io[6]A)-hydroxylase low > 74
Serratia liquefaciens MT49 0.61 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.42 IAI46_02330 tRNA-(ms[2]io[6]A)-hydroxylase low > 86
Rahnella sp. WP5 0.61 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.51 EX31_RS22630 tRNA-(ms[2]io[6]A)-hydroxylase low > 89
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.48 B158DRAFT_1015 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_15330 glycine dehydrogenase (decarboxylating) 0.36 CSW01_09555 tRNA-(ms[2]io[6]A)-hydroxylase low > 62

Not shown: 18 genomes with orthologs for AO353_08720 only; 15 genomes with orthologs for AO353_22955 only