Conservation of cofitness between AO353_08720 and AO353_17655 in Pseudomonas fluorescens FW300-N2E3

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_08720 glycine dehydrogenase 1.0 AO353_17655 permease 0.25 19
Pseudomonas fluorescens FW300-N1B4 0.91 Pf1N1B4_2236 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.89 Pf1N1B4_3329 Putative permease PerM (= YfgO) 0.23 20
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_904 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.83 PfGW456L13_4510 Putative permease PerM (= YfgO) low > 87
Pseudomonas stutzeri RCH2 0.82 Psest_0183 glycine dehydrogenase (decarboxylating) 0.70 Psest_1512 Predicted permease low > 67
Pseudomonas putida KT2440 0.81 PP_5192 glycine dehydrogenase 0.76 PP_1234 putative permease low > 96
Alteromonas macleodii MIT1002 0.63 MIT1002_02971 Glycine dehydrogenase [decarboxylating] 0.43 MIT1002_02210 pheromone autoinducer 2 transporter low > 70
Shewanella amazonensis SB2B 0.63 Sama_2719 glycine dehydrogenase (RefSeq) 0.41 Sama_1911 hypothetical protein (RefSeq) low > 62
Escherichia coli BW25113 0.63 b2903 gcvP glycine dehydrogenase (NCBI) 0.46 b2493 yfgO predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC62 0.63 BNILDI_09980 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 BNILDI_12300 perM Putative permease PerM low > 75
Escherichia coli Nissle 1917 0.63 ECOLIN_RS16165 aminomethyl-transferring glycine dehydrogenase 0.46 ECOLIN_RS14160 AI-2E family transporter low > 55
Escherichia coli BL21 0.63 ECD_02735 glycine decarboxylase, PLP-dependent, subunit P of glycine cleavage complex 0.46 ECD_02385 putative UPF0118 family inner membrane permease low > 61
Shewanella loihica PV-4 0.63 Shew_3062 glycine dehydrogenase (RefSeq) 0.39 Shew_1843 hypothetical protein (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.63 OHPLBJKB_00812 Glycine dehydrogenase (decarboxylating) 0.46 OHPLBJKB_01233 Putative transport protein YhhT low > 73
Escherichia coli ECOR38 0.63 HEPCGN_18820 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 HEPCGN_21005 perM Putative permease PerM low > 87
Escherichia coli ECOR27 0.63 NOLOHH_11445 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 NOLOHH_13490 perM Putative permease PerM low > 75
Escherichia fergusonii Becca 0.63 EFB2_00999 Glycine dehydrogenase (decarboxylating) 0.46 EFB2_01405 Putative transport protein YhhT low > 86
Escherichia coli ECRC102 0.62 NIAGMN_17295 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 NIAGMN_19610 perM Putative permease PerM — —
Escherichia coli ECRC98 0.62 JDDGAC_23170 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 JDDGAC_25785 perM Putative permease PerM low > 86
Escherichia coli ECRC101 0.62 MCAODC_10050 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 MCAODC_12370 perM Putative permease PerM 0.55 20
Escherichia coli ECRC100 0.62 OKFHMN_19530 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 OKFHMN_21840 perM Putative permease PerM low > 80
Escherichia coli ECRC99 0.62 KEDOAH_08610 gcvP aminomethyl-transferring glycine dehydrogenase 0.46 KEDOAH_06380 perM Putative permease PerM — —
Shewanella oneidensis MR-1 0.62 SO0781 gcvP glycine cleavage system P protein (NCBI ptt file) 0.39 SO2867 permease PerM, putative (NCBI ptt file) low > 76
Enterobacter sp. TBS_079 0.62 MPMX20_03762 Glycine dehydrogenase (decarboxylating) 0.47 MPMX20_03343 Putative transport protein YhhT low > 85
Shewanella sp. ANA-3 0.62 Shewana3_3499 glycine dehydrogenase (RefSeq) 0.40 Shewana3_1651 hypothetical protein (RefSeq) low > 73
Enterobacter asburiae PDN3 0.62 EX28DRAFT_2955 glycine dehydrogenase (decarboxylating) 0.47 EX28DRAFT_0179 Predicted permease low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.62 GFF3003 Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) 0.46 GFF2176 Putative permease PerM (= YfgO) low > 78
Klebsiella michiganensis M5al 0.61 BWI76_RS23870 Glycine dehydrogenase (aminomethyl-transferring) (EC 1.4.4.2) (from data) 0.47 BWI76_RS20920 AI-2E family transporter low > 92
Serratia liquefaciens MT49 0.61 IAI46_20850 aminomethyl-transferring glycine dehydrogenase 0.44 IAI46_18795 AI-2E family transporter low > 86
Rahnella sp. WP5 0.61 EX31_RS21520 aminomethyl-transferring glycine dehydrogenase 0.45 EX31_RS22725 AI-2E family transporter low > 89
Kangiella aquimarina DSM 16071 0.60 B158DRAFT_0545 glycine dehydrogenase (decarboxylating) 0.50 B158DRAFT_2441 Predicted permease — —
Vibrio cholerae E7946 ATCC 55056 0.58 CSW01_15330 glycine dehydrogenase (decarboxylating) 0.45 CSW01_10775 AI-2E family transporter low > 62

Not shown: 8 genomes with orthologs for AO353_08720 only; 9 genomes with orthologs for AO353_17655 only