Conservation of cofitness between AO353_22890 and AO353_13415 in Pseudomonas fluorescens FW300-N2E3

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N2E3 1.0 AO353_22890 secretion protein HlyD 1.0 AO353_13415 TetR family transcriptional regulator 0.41 3
Pseudomonas fluorescens GW456-L13 0.83 PfGW456L13_3267 RND transporter, membrane fusion protein 0.93 PfGW456L13_110 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 87
Pseudomonas fluorescens FW300-N1B4 0.82 Pf1N1B4_4664 RND transporter, membrane fusion protein 0.93 Pf1N1B4_1370 Unsaturated fatty acid biosythesis repressor FabR, TetR family
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_1273 Probable RND efflux membrane fusion protein 0.92 Pf6N2E2_3568 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 103
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_25870 secretion protein HlyD 0.92 AO356_08445 TetR family transcriptional regulator low > 104
Pseudomonas sp. RS175 0.80 PFR28_02195 Multidrug resistance protein MdtA 0.93 PFR28_05164 HTH-type transcriptional repressor FabR low > 88
Pseudomonas simiae WCS417 0.79 PS417_12740 secretion protein HlyD 0.90 PS417_02720 TetR family transcriptional regulator low > 88
Pseudomonas fluorescens SBW25 0.78 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.90 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas fluorescens SBW25-INTG 0.78 PFLU_RS13425 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.90 PFLU_RS02790 TetR family transcriptional regulator low > 109
Pseudomonas syringae pv. syringae B728a 0.65 Psyr_2482 Secretion protein HlyD 0.80 Psyr_4450 transcriptional regulator, TetR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.65 Psyr_2482 Secretion protein HlyD 0.80 Psyr_4450 transcriptional regulator, TetR family low > 86
Pseudomonas putida KT2440 0.61 PP_3585 multidrug efflux transport system - putative membrane fusion protein 0.73 PP_4859 Transcriptional regulator, TetR family low > 96
Pseudomonas sp. S08-1 0.51 OH686_00920 Multidrug efflux system MdtABC-TolC, membrane fusion component MdtA 0.71 OH686_16690 Transcriptional regulator, AcrR family low > 80
Enterobacter asburiae PDN3 0.40 EX28DRAFT_0484 RND family efflux transporter, MFP subunit 0.27 EX28DRAFT_4426 transcriptional regulator, TetR family low > 76
Pantoea sp. MT58 0.40 IAI47_06875 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.27 IAI47_00940 HTH-type transcriptional repressor FabR low > 76
Escherichia coli BW25113 0.40 b2074 b2074 putative membrane protein (VIMSS) 0.27 b3963 fabR DNA-binding transcriptional repressor (RefSeq) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.40 OHPLBJKB_01630 Multidrug resistance protein MdtA 0.27 OHPLBJKB_04087 HTH-type transcriptional repressor FabR low > 73
Escherichia coli ECRC62 0.40 BNILDI_14460 mdtA multidrug efflux RND transporter subunit MdtA 0.27 BNILDI_05835 fabR HTH-type transcriptional repressor FabR low > 75
Escherichia coli ECRC99 0.40 KEDOAH_03950 mdtA multidrug efflux RND transporter subunit MdtA 0.27 KEDOAH_14615 fabR HTH-type transcriptional repressor FabR
Escherichia coli ECRC98 0.40 JDDGAC_28310 mdtA multidrug efflux RND transporter subunit MdtA 0.27 JDDGAC_17170 fabR HTH-type transcriptional repressor FabR low > 86
Escherichia coli ECRC101 0.40 MCAODC_20740 mdtA multidrug efflux RND transporter subunit MdtA 0.27 MCAODC_04045 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia coli BL21 0.40 ECD_01979 multidrug efflux system, subunit A 0.27 ECD_03848 transcriptional repressor of fabA and fabB low > 61
Escherichia coli ECRC100 0.40 OKFHMN_24200 mdtA multidrug efflux RND transporter subunit MdtA 0.27 OKFHMN_13545 fabR HTH-type transcriptional repressor FabR low > 80
Escherichia coli ECRC102 0.40 NIAGMN_22145 mdtA multidrug efflux RND transporter subunit MdtA 0.27 NIAGMN_11295 fabR HTH-type transcriptional repressor FabR
Escherichia coli ECOR27 0.39 NOLOHH_15545 mdtA multidrug efflux RND transporter subunit MdtA 0.27 NOLOHH_05690 fabR HTH-type transcriptional repressor FabR low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03060 Multidrug resistance protein MdtA 0.27 MPMX20_04517 HTH-type transcriptional repressor FabR low > 85
Escherichia coli Nissle 1917 0.39 ECOLIN_RS12195 multidrug efflux RND transporter subunit MdtA 0.27 ECOLIN_RS22890 HTH-type transcriptional repressor FabR low > 55
Escherichia coli ECOR38 0.39 HEPCGN_02890 mdtA multidrug efflux RND transporter subunit MdtA 0.27 HEPCGN_12200 fabR HTH-type transcriptional repressor FabR low > 87
Escherichia fergusonii Becca 0.39 EFB2_01781 Multidrug resistance protein MdtA 0.27 EFB2_04647 HTH-type transcriptional repressor FabR low > 86
Klebsiella michiganensis M5al 0.39 BWI76_RS19250 multidrug transporter subunit MdtA 0.27 BWI76_RS00875 DNA-binding transcriptional regulator FabR low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.38 GFF3855 Multidrug transporter MdtA 0.28 GFF2349 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 78
Dickeya dianthicola 67-19 0.38 HGI48_RS15340 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 HGI48_RS20395 HTH-type transcriptional repressor FabR low > 71
Dickeya dadantii 3937 0.38 DDA3937_RS15260 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 DDA3937_RS00980 HTH-type transcriptional repressor FabR low > 74
Pectobacterium carotovorum WPP14 0.37 HER17_RS06325 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.27 HER17_RS00965 HTH-type transcriptional repressor FabR low > 75
Erwinia tracheiphila SCR3 0.37 LU632_RS08695 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 LU632_RS19580 fabR HTH-type transcriptional repressor FabR low > 74
Dickeya dianthicola ME23 0.36 DZA65_RS16160 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 DZA65_RS21440 HTH-type transcriptional repressor FabR low > 75
Rahnella sp. WP5 0.36 EX31_RS13385 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 EX31_RS14160 HTH-type transcriptional repressor FabR low > 89
Serratia liquefaciens MT49 0.36 IAI46_18970 MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit 0.26 IAI46_24465 HTH-type transcriptional repressor FabR low > 86
Xanthomonas campestris pv. campestris strain 8004 0.29 Xcc-8004.4791.1 Probable Co/Zn/Cd efflux system membrane fusion protein 0.18 Xcc-8004.4923.1 Unsaturated fatty acid biosythesis repressor FabR, TetR family low > 74

Not shown: 23 genomes with orthologs for AO353_22890 only; 6 genomes with orthologs for AO353_13415 only