Conservation of cofitness between Sama_1923 and Sama_2631 in Shewanella amazonensis SB2B

25 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella amazonensis SB2B 1.0 Sama_1923 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 1.0 Sama_2631 TonB-dependent receptor domain-containing protein (RefSeq) 0.67 6
Shewanella sp. ANA-3 0.84 Shewana3_1636 SpoVR family protein (RefSeq) 0.58 Shewana3_3472 TonB-dependent siderophore receptor (RefSeq) low > 73
Shewanella oneidensis MR-1 0.83 SO2884 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.58 SO0815 TonB-dependent receptor C-terminal domain protein (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.80 Shew_1831 hypothetical protein (RefSeq) 0.57 Shew_2990 TonB-dependent receptor (RefSeq) low > 60
Klebsiella michiganensis M5al 0.76 BWI76_RS17740 SpoVR family protein 0.07 BWI76_RS13500 TonB-dependent receptor low > 92
Alteromonas macleodii MIT1002 0.75 MIT1002_01231 SpoVR family protein 0.06 MIT1002_00716 Outer membrane cobalamin translocator low > 70
Escherichia coli ECRC62 0.75 BNILDI_18895 ycgB SpoVR family protein 0.07 BNILDI_17625 yncD putative TonB-dependent receptor YncD — —
Escherichia coli BW25113 0.75 b1188 ycgB ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.07 b1451 yncD predicted iron outer membrane transporter (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_20730 ycgB SpoVR family protein 0.07 NOLOHH_19190 yncD putative TonB-dependent receptor YncD — —
Escherichia coli BL21 0.75 ECD_01163 SpoVR family stationary phase protein 0.07 ECD_01408 putative iron outer membrane transporter low > 60
Enterobacter asburiae PDN3 0.75 EX28DRAFT_0765 Uncharacterized conserved protein 0.08 EX28DRAFT_1043 TonB-dependent siderophore receptor low > 76
Escherichia coli ECRC99 0.75 KEDOAH_25300 ycgB SpoVR family protein 0.07 KEDOAH_26920 yncD putative TonB-dependent receptor YncD — —
Escherichia coli ECRC102 0.75 NIAGMN_27935 ycgB SpoVR family protein 0.07 NIAGMN_25655 yncD putative TonB-dependent receptor YncD — —
Escherichia coli Nissle 1917 0.75 ECOLIN_RS07180 SpoVR family protein 0.08 ECOLIN_RS16645 bifunctional siderophore receptor/adhesin Iha — —
Escherichia fergusonii Becca 0.75 EFB2_02744 hypothetical protein 0.08 EFB2_02535 Metal-pseudopaline receptor CntO low > 86
Escherichia coli ECRC101 0.75 MCAODC_21885 ycgB SpoVR family protein 0.07 MCAODC_16420 yncD putative TonB-dependent receptor YncD — —
Escherichia coli ECRC98 0.75 JDDGAC_06225 ycgB SpoVR family protein 0.07 JDDGAC_04010 yncD putative TonB-dependent receptor YncD — —
Escherichia coli ECRC101 0.75 OKFHMN_28285 ycgB SpoVR family protein 0.07 OKFHMN_01520 yncD putative TonB-dependent receptor YncD — —
Escherichia coli ECOR38 0.75 HEPCGN_24745 ycgB SpoVR family protein 0.07 HEPCGN_26290 yncD putative TonB-dependent receptor YncD low > 85
Enterobacter sp. TBS_079 0.74 MPMX20_02700 hypothetical protein 0.08 MPMX20_02408 Fe(3+) dicitrate transport protein FecA low > 85
Rahnella sp. WP5 0.74 EX31_RS10500 SpoVR family protein 0.07 EX31_RS00270 TonB-dependent receptor low > 89
Marinobacter adhaerens HP15 0.71 HP15_2935 SpoVR family protein 0.05 HP15_3953 outer membrane receptor for transport of vitamin B low > 73
Pseudomonas simiae WCS417 0.70 PS417_25840 SpoVR family protein 0.07 PS417_25210 TonB-dependent receptor low > 88
Pseudomonas fluorescens FW300-N2E3 0.70 AO353_07345 ycgB component of nitrogen-related signalling system (of yeaGH-ycgB) (from data) 0.07 AO353_06660 TonB-dependent receptor low > 101
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_05234 Stage V sporulation protein SpoVR/YcgB, involved in spore cortex formation 0.06 H281DRAFT_01336 Outer membrane receptor proteins, mostly Fe transport low > 103
Paraburkholderia graminis OAS925 0.66 ABIE53_002316 stage V sporulation protein R 0.05 ABIE53_005476 iron complex outermembrane receptor protein low > 113

Not shown: 37 genomes with orthologs for Sama_1923 only; 7 genomes with orthologs for Sama_2631 only