Conservation of cofitness between Shew_1150 and Shew_0823 in Shewanella loihica PV-4

21 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella loihica PV-4 1.0 Shew_1150 transmembrane pair domain-containing protein (RefSeq) 1.0 Shew_0823 LysR family transcriptional regulator (RefSeq) 0.31 19
Pectobacterium carotovorum WPP14 0.43 HER17_RS17110 multidrug/biocide efflux PACE transporter 0.35 HER17_RS03700 LysR family transcriptional regulator 0.48 74
Dickeya dianthicola 67-19 0.41 HGI48_RS04510 multidrug/biocide efflux PACE transporter 0.32 HGI48_RS12020 LysR family transcriptional regulator low > 71
Enterobacter asburiae PDN3 0.40 EX28DRAFT_2925 Predicted membrane protein 0.28 EX28DRAFT_3600 Transcriptional regulator low > 76
Dickeya dianthicola ME23 0.40 DZA65_RS04430 multidrug/biocide efflux PACE transporter 0.31 DZA65_RS09955 LysR family transcriptional regulator low > 75
Enterobacter sp. TBS_079 0.39 MPMX20_03721 hypothetical protein 0.27 MPMX20_00697 HTH-type transcriptional regulator PgrR low > 85
Dickeya dadantii 3937 0.39 DDA3937_RS04550 multidrug/biocide efflux PACE transporter 0.34 DDA3937_RS11930 LysR family transcriptional regulator low > 74
Pantoea sp. MT58 0.39 IAI47_14420 multidrug/biocide efflux PACE transporter 0.29 IAI47_19460 LysR family transcriptional regulator low > 76
Pseudomonas putida KT2440 0.36 PP_3512 conserved membrane protein of unknown function 0.35 PP_1391 Transcriptional regulator, LysR family low > 96
Klebsiella michiganensis M5al 0.36 BWI76_RS23455 Na(+)-translocating NADH-quinone reductase subunit E 0.28 BWI76_RS13845 LysR family transcriptional regulator low > 92
Pseudomonas simiae WCS417 0.35 PS417_21930 membrane protein 0.35 PS417_07315 LysR family transcriptional regulator low > 88
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_03190 hypothetical protein 0.33 AO353_03885 LysR family transcriptional regulator low > 101
Pseudomonas syringae pv. syringae B728a 0.34 Psyr_3358 transmembrane pair 0.33 Psyr_2219 transcriptional regulator, LysR family low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.34 Psyr_3358 transmembrane pair 0.33 Psyr_2219 transcriptional regulator, LysR family low > 86
Pseudomonas fluorescens FW300-N1B4 0.34 Pf1N1B4_3401 FIG00961830: hypothetical protein 0.34 Pf1N1B4_700 LysR-family transcriptional regulator clustered with PA0057 low > 87
Pseudomonas fluorescens GW456-L13 0.32 PfGW456L13_1938 FIG00961830: hypothetical protein 0.34 PfGW456L13_1790 LysR-family transcriptional regulator clustered with PA0057 low > 87
Acidovorax sp. GW101-3H11 0.29 Ac3H11_3276 hypothetical protein 0.32 Ac3H11_2894 LysR-family transcriptional regulator clustered with PA0057 low > 79
Pseudomonas fluorescens FW300-N2E2 0.29 Pf6N2E2_92 hypothetical protein 0.34 Pf6N2E2_5561 LysR-family transcriptional regulator clustered with PA0057 low > 103
Pseudomonas fluorescens FW300-N2C3 0.28 AO356_21560 hypothetical protein 0.35 AO356_18185 LysR family transcriptional regulator low > 104
Variovorax sp. OAS795 0.26 ABID97_RS03465 PACE efflux transporter 0.34 ABID97_RS17535 LysR family transcriptional regulator low > 91
Herbaspirillum seropedicae SmR1 0.25 HSERO_RS22620 membrane protein 0.32 HSERO_RS23200 LysR family transcriptional regulator low > 78
Dechlorosoma suillum PS 0.23 Dsui_0787 putative membrane protein 0.32 Dsui_3173 transcriptional regulator low > 51

Not shown: 15 genomes with orthologs for Shew_1150 only; 8 genomes with orthologs for Shew_0823 only