Conservation of cofitness between BT3320 and BT3935 in Bacteroides thetaiotaomicron VPI-5482

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT3320 dihydrodipicolinate reductase (NCBI ptt file) 1.0 BT3935 aminotransferase (NCBI ptt file) 0.69 9
Bacteroides ovatus ATCC 8483 0.91 BACOVA_00959 dihydrodipicolinate reductase 0.94 BACOVA_01161 aminotransferase, class I/II 0.79 48
Phocaeicola vulgatus CL09T03C04 0.86 HMPREF1058_RS11730 4-hydroxy-tetrahydrodipicolinate reductase 0.79 HMPREF1058_RS14790 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.59 20
Phocaeicola dorei CL03T12C01 0.86 ABI39_RS05175 4-hydroxy-tetrahydrodipicolinate reductase 0.78 ABI39_RS10505 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.57 43
Bacteroides stercoris CC31F 0.85 HMPREF1181_RS02275 4-hydroxy-tetrahydrodipicolinate reductase 0.87 HMPREF1181_RS06565 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.71 14
Parabacteroides merdae CL09T00C40 0.60 HMPREF1078_RS05545 4-hydroxy-tetrahydrodipicolinate reductase 0.73 HMPREF1078_RS01130 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme 0.88 24
Echinicola vietnamensis KMM 6221, DSM 17526 0.37 Echvi_2395 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) (from data) 0.52 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_04750 4-hydroxy-tetrahydrodipicolinate reductase 0.45 CA264_01550 aminotransferase — —
Pseudomonas sp. S08-1 0.18 OH686_17070 4-hydroxy-tetrahydrodipicolinate reductase 0.27 OH686_04000 Glutamate-pyruvate aminotransferase AlaC — —
Methanococcus maripaludis JJ 0.18 MMJJ_RS00345 4-hydroxy-tetrahydrodipicolinate reductase 0.23 MMJJ_RS06510 LL-diaminopimelate aminotransferase low > 28
Methanococcus maripaludis S2 0.18 MMP_RS04790 4-hydroxy-tetrahydrodipicolinate reductase 0.23 MMP_RS07845 LL-diaminopimelate aminotransferase low > 25
Magnetospirillum magneticum AMB-1 0.17 AMB_RS22745 4-hydroxy-tetrahydrodipicolinate reductase 0.27 AMB_RS18860 pyridoxal phosphate-dependent aminotransferase — —
Dechlorosoma suillum PS 0.17 Dsui_3066 dihydrodipicolinate reductase 0.27 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase low > 51
Caulobacter crescentus NA1000 0.16 CCNA_03664 dihydrodipicolinate reductase 0.27 CCNA_01446 LL-diaminopimelate aminotransferase — —
Caulobacter crescentus NA1000 Δfur 0.16 CCNA_03664 dihydrodipicolinate reductase 0.27 CCNA_01446 LL-diaminopimelate aminotransferase — —
Castellaniella sp019104865 MT123 0.16 ABCV34_RS07485 4-hydroxy-tetrahydrodipicolinate reductase 0.29 ABCV34_RS02290 alanine transaminase — —
Mycobacterium tuberculosis H37Rv 0.16 Rv2773c Dihydrodipicolinate reductase DapB (DHPR) 0.15 Rv1178 Probable aminotransferase — —
Dickeya dadantii 3937 0.16 DDA3937_RS18315 4-hydroxy-tetrahydrodipicolinate reductase 0.29 DDA3937_RS14825 alanine transaminase — —
Escherichia coli ECRC98 0.16 JDDGAC_14550 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 JDDGAC_26335 alaC alanine transaminase — —
Escherichia coli ECRC101 0.16 OKFHMN_10955 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 OKFHMN_22370 alaC alanine transaminase — —
Escherichia coli ECRC62 0.16 BNILDI_08315 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 BNILDI_12910 alaC alanine transaminase — —
Escherichia coli ECRC101 0.16 MCAODC_01470 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 MCAODC_12900 alaC alanine transaminase — —
Dickeya dianthicola 67-19 0.16 HGI48_RS18250 4-hydroxy-tetrahydrodipicolinate reductase 0.29 HGI48_RS14755 alanine transaminase — —
Escherichia coli ECRC102 0.16 NIAGMN_08805 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 NIAGMN_20145 alaC alanine transaminase — —
Escherichia coli ECRC99 0.16 KEDOAH_17200 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 KEDOAH_05850 alaC alanine transaminase — —
Escherichia fergusonii Becca 0.16 EFB2_04014 4-hydroxy-tetrahydrodipicolinate reductase 0.28 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli Nissle 1917 0.16 ECOLIN_RS00160 4-hydroxy-tetrahydrodipicolinate reductase 0.28 ECOLIN_RS13690 alanine transaminase — —
Dickeya dianthicola ME23 0.16 DZA65_RS19390 4-hydroxy-tetrahydrodipicolinate reductase 0.29 DZA65_RS15705 alanine transaminase — —
Escherichia coli ECOR38 0.16 HEPCGN_08940 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 HEPCGN_21580 alaC alanine transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.16 GFF216 4-hydroxy-tetrahydrodipicolinate reductase (EC 1.17.1.8) 0.28 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Escherichia coli BW25113 0.16 b0031 dapB dihydrodipicolinate reductase (NCBI) 0.28 b2379 yfdZ hypothetical protein (NCBI) — —
Escherichia coli BL21 0.15 ECD_00035 dihydrodipicolinate reductase 0.28 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.15 OHPLBJKB_03626 4-hydroxy-tetrahydrodipicolinate reductase 0.28 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli ECOR27 0.15 NOLOHH_03285 dapB 4-hydroxy-tetrahydrodipicolinate reductase 0.28 NOLOHH_14055 alaC alanine transaminase — —
Enterobacter sp. TBS_079 0.15 MPMX20_00738 4-hydroxy-tetrahydrodipicolinate reductase 0.28 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC — —
Bifidobacterium breve UCC2003 0.15 BBR_RS12990 4-hydroxy-tetrahydrodipicolinate reductase 0.24 BBR_RS13460 aminotransferase low > 34
Brevundimonas sp. GW460-12-10-14-LB2 0.15 A4249_RS13645 4-hydroxy-tetrahydrodipicolinate reductase 0.30 A4249_RS02425 LL-diaminopimelate aminotransferase — —
Rhizobium sp. OAE497 0.14 ABIE40_RS13905 4-hydroxy-tetrahydrodipicolinate reductase 0.29 ABIE40_RS08645 LL-diaminopimelate aminotransferase low > 107

Not shown: 5 genomes with orthologs for BT3320 only; 38 genomes with orthologs for BT3935 only