Conservation of cofitness between BT0770 and BT0643 in Bacteroides thetaiotaomicron VPI-5482

36 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Bacteroides thetaiotaomicron VPI-5482 1.0 BT0770 conserved hypothetical protein (NCBI ptt file) 1.0 BT0643 RNA methyltransferase (NCBI ptt file) 0.45 1
Bacteroides ovatus ATCC 8483 0.93 BACOVA_02502 YhcH/YjgK/YiaL family protein 0.97 BACOVA_02267 23S rRNA (uracil-5-)-methyltransferase RumA low > 94
Bacteroides stercoris CC31F 0.87 HMPREF1181_RS14785 YhcH/YjgK/YiaL family protein 0.92 HMPREF1181_RS16525 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 56
Phocaeicola dorei CL03T12C01 0.71 ABI39_RS17320 YhcH/YjgK/YiaL family protein 0.87 ABI39_RS17490 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 72
Phocaeicola vulgatus CL09T03C04 0.70 HMPREF1058_RS03905 YhcH/YjgK/YiaL family protein 0.88 HMPREF1058_RS03720 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 67
Parabacteroides merdae CL09T00C40 0.45 HMPREF1078_RS01890 YhcH/YjgK/YiaL family protein 0.75 HMPREF1078_RS02375 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 61
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_07660 hypothetical protein 0.63 CA264_02005 23S rRNA (uracil-5-)-methyltransferase RumA low > 74
Mucilaginibacter yixingensis YX-36 DSM 26809 0.40 ABZR88_RS16220 YhcH/YjgK/YiaL family protein 0.60 ABZR88_RS21250 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 71
Shewanella loihica PV-4 0.34 Shew_3353 hypothetical protein (RefSeq) 0.16 Shew_1201 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) low > 60
Shewanella sp. ANA-3 0.33 Shewana3_3716 hypothetical protein (RefSeq) 0.17 Shewana3_1110 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) low > 73
Shewanella oneidensis MR-1 0.33 SO4189 conserved hypothetical protein (NCBI ptt file) 0.17 SO3456 RNA methyltransferase, TrmA family (NCBI ptt file) low > 76
Desulfovibrio vulgaris Hildenborough JW710 0.31 DVU2308 conserved hypothetical protein TIGR00022 (TIGR) 0.30 DVU0924 rumA 23S rRNA (uracil-5-)-methyltransferase RumA (TIGR) low > 55
Shewanella amazonensis SB2B 0.28 Sama_0503 hypothetical protein (RefSeq) 0.18 Sama_1032 rumA 23S rRNA 5-methyluridine methyltransferase (RefSeq) low > 62
Serratia liquefaciens MT49 0.28 IAI46_20955 YhcH/YjgK/YiaL family protein 0.16 IAI46_03595 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 86
Klebsiella michiganensis M5al 0.27 BWI76_RS00085 hypothetical protein 0.15 BWI76_RS22810 23S rRNA (uracil(1939)-C(5))-methyltransferase low > 92
Dickeya dadantii 3937 0.27 DDA3937_RS19690 YhcH/YjgK/YiaL family protein 0.14 DDA3937_RS17020 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 74
Erwinia tracheiphila SCR3 0.26 LU632_RS04255 YhcH/YjgK/YiaL family protein 0.14 LU632_RS06345 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 74
Escherichia coli HS(pFamp)R (ATCC 700891) 0.25 OHPLBJKB_00128 putative protein YhcH 0.16 OHPLBJKB_00946 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECOR38 0.25 HEPCGN_14780 yiaL Protein YiaL 0.16 HEPCGN_19495 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 85
Fusobacterium nucleatum SB010 0.25 HUW76_07095 YhcH/YjgK/YiaL family protein 0.24 HUW76_01255 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 35
Escherichia coli ECRC62 0.25 BNILDI_03710 yiaL Protein YiaL 0.16 BNILDI_10625 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECOR27 0.25 NOLOHH_07835 yiaL Protein YiaL 0.16 NOLOHH_12120 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Enterobacter sp. TBS_079 0.25 MPMX20_00154 Toxin-antitoxin biofilm protein TabA 0.12 MPMX20_01500 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC low > 85
Enterobacter asburiae PDN3 0.25 EX28DRAFT_3453 YhcH/YjgK/YiaL family protein 0.14 EX28DRAFT_2865 23S rRNA (uracil-5-)-methyltransferase RumA low > 76
Escherichia coli Nissle 1917 0.24 ECOLIN_RS20450 YhcH/YjgK/YiaL family protein 0.16 ECOLIN_RS15520 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 52
Escherichia fergusonii Becca 0.24 EFB2_00231 hypothetical protein 0.16 EFB2_01132 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 86
Escherichia coli BL21 0.24 ECD_03428 DUF386 family protein 0.16 ECD_02630 23S rRNA m(5)U1939 methyltransferase, SAM-dependent — —
Desulfovibrio vulgaris Miyazaki F 0.24 DvMF_3182 hypothetical protein (RefSeq) 0.31 DvMF_1383 RNA methyltransferase, TrmA family (RefSeq) low > 51
Escherichia coli BW25113 0.24 b3576 yiaL hypothetical protein (NCBI) 0.16 b2785 rumA 23S rRNA (uracil-5-)-methyltransferase (NCBI) low > 76
Escherichia coli ECRC99 0.23 KEDOAH_16310 tabA toxin-antitoxin biofilm protein TabA 0.16 KEDOAH_07885 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECRC102 0.23 NIAGMN_09695 tabA toxin-antitoxin biofilm protein TabA 0.16 NIAGMN_18015 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECRC98 0.23 JDDGAC_15485 tabA toxin-antitoxin biofilm protein TabA 0.16 JDDGAC_23910 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECRC101 0.23 MCAODC_02350 tabA toxin-antitoxin biofilm protein TabA 0.16 MCAODC_10770 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Escherichia coli ECRC101 0.23 OKFHMN_11845 tabA toxin-antitoxin biofilm protein TabA 0.16 OKFHMN_20245 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD — —
Dickeya dianthicola 67-19 0.23 HGI48_RS01905 YhcH/YjgK/YiaL family protein 0.14 HGI48_RS17075 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 71
Dickeya dianthicola ME23 0.23 DZA65_RS01975 YhcH/YjgK/YiaL family protein 0.13 DZA65_RS18150 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 75
Pectobacterium carotovorum WPP14 0.22 HER17_RS19505 YhcH/YjgK/YiaL family protein 0.14 HER17_RS04110 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD low > 75

Not shown: 0 genomes with orthologs for BT0770 only; 47 genomes with orthologs for BT0643 only