Conservation of cofitness between SO0873 and SO3740 in Shewanella oneidensis MR-1

30 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Shewanella oneidensis MR-1 1.0 SO0873 glutamyl-tRNA synthetase domain protein (NCBI ptt file) 1.0 SO3740 pntA NAD(P) transhydrogenase, alpha subunit (NCBI ptt file) 0.31 10
Shewanella sp. ANA-3 0.90 Shewana3_3405 glutamyl-tRNA synthetase, class Ic (RefSeq) 0.90 Shewana3_0854 pntA NAD(P) transhydrogenase subunit alpha (RefSeq) low > 73
Shewanella amazonensis SB2B 0.68 Sama_0779 glutamyl-tRNA synthetase domain-containing protein (RefSeq) 0.86 Sama_2840 pntA NAD(P) transhydrogenase subunit alpha (RefSeq) low > 62
Enterobacter asburiae PDN3 0.51 EX28DRAFT_3733 glutamyl-queuosine tRNA(Asp) synthetase 0.68 EX28DRAFT_1544 NAD(P) transhydrogenase, alpha subunit low > 76
Escherichia coli BL21 0.50 ECD_00143 glutamyl-Q tRNA(Asp) synthetase 0.73 ECD_01572 pyridine nucleotide transhydrogenase, alpha subunit low > 61
Enterobacter sp. TBS_079 0.50 MPMX20_00830 Glutamyl-Q tRNA(Asp) synthetase 0.69 MPMX20_02031 NAD(P) transhydrogenase subunit alpha low > 85
Escherichia coli ECOR27 0.50 NOLOHH_02695 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 NOLOHH_18195 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.50 OHPLBJKB_03518 Glutamyl-Q tRNA(Asp) synthetase 0.73 OHPLBJKB_02123 NAD(P) transhydrogenase subunit alpha low > 73
Escherichia coli BW25113 0.50 b0144 yadB glutamyl-Q tRNA(Asp) synthetase (RefSeq) 0.73 b1603 pntA NAD(P) transhydrogenase subunit alpha (NCBI) low > 76
Escherichia coli ECRC101 0.50 MCAODC_00865 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 MCAODC_17720 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 87
Escherichia coli ECRC99 0.50 KEDOAH_17805 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 KEDOAH_00415 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha — —
Escherichia coli ECRC102 0.50 NIAGMN_08200 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 NIAGMN_00385 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha — —
Escherichia coli ECRC100 0.50 OKFHMN_10350 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 OKFHMN_27690 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 80
Escherichia coli ECRC98 0.50 JDDGAC_13945 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 JDDGAC_02280 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 86
Escherichia coli ECOR38 0.50 HEPCGN_08300 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.73 HEPCGN_06065 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 87
Escherichia coli ECRC62 0.50 BNILDI_08975 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.74 BNILDI_16985 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 75
Escherichia fergusonii Becca 0.50 EFB2_03900 Glutamyl-Q tRNA(Asp) synthetase 0.73 EFB2_02389 NAD(P) transhydrogenase subunit alpha low > 86
Escherichia coli Nissle 1917 0.50 ECOLIN_RS00795 tRNA glutamyl-Q(34) synthetase GluQRS 0.73 ECOLIN_RS08955 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha — —
Klebsiella michiganensis M5al 0.49 BWI76_RS05010 tRNA glutamyl-Q synthetase 0.74 BWI76_RS16205 NAD(P) transhydrogenase subunit alpha low > 92
Serratia liquefaciens MT49 0.49 IAI46_21215 tRNA glutamyl-Q(34) synthetase GluQRS 0.66 IAI46_13275 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.48 GFF88 glutamyl-Q-tRNA synthetase 0.71 GFF1796 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) low > 78
Dickeya dianthicola 67-19 0.48 HGI48_RS16055 tRNA glutamyl-Q(34) synthetase GluQRS 0.65 HGI48_RS10915 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 71
Dickeya dianthicola ME23 0.47 DZA65_RS17140 tRNA glutamyl-Q(34) synthetase GluQRS 0.65 DZA65_RS11375 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha 0.48 5
Pectobacterium carotovorum WPP14 0.47 HER17_RS05575 tRNA glutamyl-Q(34) synthetase GluQRS 0.67 HER17_RS10510 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 75
Vibrio cholerae E7946 ATCC 55056 0.47 CSW01_03150 tRNA glutamyl-Q(34) synthetase GluQRS 0.70 CSW01_17040 NAD(P)(+) transhydrogenase (Re/Si-specific) subunit alpha low > 62
Rahnella sp. WP5 0.47 EX31_RS03255 tRNA glutamyl-Q(34) synthetase GluQRS 0.66 EX31_RS07215 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 89
Dickeya dadantii 3937 0.47 DDA3937_RS15940 tRNA glutamyl-Q(34) synthetase GluQRS 0.64 DDA3937_RS10965 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 74
Pantoea sp. MT58 0.47 IAI47_15640 tRNA glutamyl-Q(34) synthetase GluQRS 0.64 IAI47_09565 Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 76
Erwinia tracheiphila SCR3 0.46 LU632_RS20085 gluQRS tRNA glutamyl-Q(34) synthetase GluQRS 0.64 LU632_RS11435 pntA Re/Si-specific NAD(P)(+) transhydrogenase subunit alpha low > 74
Marinobacter adhaerens HP15 0.35 HP15_331 glutamyl-Q tRNA(Asp) synthetase 0.60 HP15_3599 NAD(P) transhydrogenase subunit alpha low > 73
Acidovorax sp. GW101-3H11 0.33 Ac3H11_4162 glutamyl-Q-tRNA synthetase 0.52 Ac3H11_661 NAD(P) transhydrogenase alpha subunit (EC 1.6.1.2) low > 79

Not shown: 48 genomes with orthologs for SO0873 only; 5 genomes with orthologs for SO3740 only